Procambarus clarkii (red swamp crayfish): 138351913
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Entry
138351913 CDS
T07930
Name
(RefSeq) autophagy-related protein 16-like isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04136
Autophagy - other
pcla04140
Autophagy - animal
pcla04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
138351913
04140 Autophagy - animal
138351913
04136 Autophagy - other
138351913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcla04131
]
138351913
03029 Mitochondrial biogenesis [BR:
pcla03029
]
138351913
Membrane trafficking [BR:
pcla04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
138351913
Others
Specific organelles associated proteins
Auto phagosome
138351913
Mitochondrial biogenesis [BR:
pcla03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
138351913
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40
ATG16
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
DSE1_N
ANAPC4_WD40
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_VPS8
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_NOL10_N
CFAP251_N
Beta-prop_EIPR1
ASA1
eIF2A
Beta-prop_ACSF4
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_HPS5
PAC11
WD40_RFWD3
Beta-prop_NWD2_C
CLIP1
TRM82_WD
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
138351913
NCBI-ProteinID:
XP_069160140
LinkDB
All DBs
Position
51:15253968..15276887
Genome browser
AA seq
558 aa
AA seq
DB search
MAWSKSSEGEWRHAIYCKLRERNKKEYENINDLIQLHNRVFEQSESLRNENLQLTLQNEK
LRQENTHLQSHGGGGSGSEGGGASSLVVQALEQKLYKLQEELTDLHRRKGENAQQLVELN
QCLQERDKIMATKDNKLAEYESDLLILREDLAAKEATLIDVQGVNQVLRDEYQTLNLAFT
ALEEKYRRAQEENRELIDRWMAQKAKDAEKLNLENDTALRKRQMVLEEQLKEAAREPKQV
NMDDKFACSPPICLSAVLPAKAYLKYDAHDGEVNCICFSPQGKMLATGGGDRKLKLWDIS
RAANAEARGLLTGSNAGVTAIDFDMEESLILGASNDFASRVWTVVDHRLRHTLTGHSGKV
MAARFLSESAKVVTGSHDRTLKIWDLRSRACIRTIFAGSSCNDLVASDSAATTIISGHFD
KKIRFWDTRTEQSANEVPLQGKITSLSLSRDGFYLLSCVRDDSLKILDLRKNQVINTFTD
DSFHVGADYTRATFSPDAMYVAAGSCDGGVYIWNVNTGKLEKTLREHSACVVACAWHPSG
KSLVSCDRAKKVIAWSDF
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcttggagtaaaagttcggagggcgagtggcgacatgctatatactgtaagctacgg
gagagaaacaagaaagagtacgagaatatcaatgatcttattcagctacataaccgtgtc
tttgaacaaagtgaatccttaagaaatgagaacctgcagctcacattacaaaatgagaag
cttcgccaagagaatacgcatttacaaagtcatggaggtggtggcagcggcagtgaaggt
ggaggtgcctcatcattggttgtacaggccttggagcagaaactatataagctacaagaa
gagctgacagatttgcatagacgaaaaggtgaaaatgctcaacagctggtcgaattgaac
cagtgccttcaggaacgtgataaaatcatggcaacaaaagacaacaaattggcagaatat
gagtcagatcttttgattttacgagaggatttagcagctaaagaggcaacacttatagat
gtccagggagttaaccaagtgctacgagatgagtaccagacacttaacctagcttttaca
gcattggaagaaaaatatagaagagcacaggaagaaaaccgagaattaattgacagatgg
atggcacagaaggctaaagatgcagaaaaactaaacctggagaatgacaccgcactcaga
aagcgacagatggtgcttgaggaacaactcaaagaagcggcacgtgagcccaagcaagtg
aacatggatgataagtttgcctgtagtcctcccatttgtctatctgctgtcctgccagct
aaggcctaccttaaatatgatgcccatgatggagaggtgaattgcatctgctttagcccc
cagggaaaaatgctggcaactgggggaggtgataggaagctgaagctatgggacataagt
cgtgcagcaaatgcagaagcaagaggacttctaacgggcagcaatgcaggagtgacagct
atagactttgatatggaagaatcgctcatcctaggtgcctcaaatgactttgccagcaga
gtatggactgttgtagatcatagattaagacacacattaacagggcattcgggtaaggta
atggccgcaagatttttgtcagaatcagcaaaggtggtaacggggtctcatgaccggacc
ctaaaaatctgggatctacggagccgtgcatgcattagaactatctttgctgggtctagc
tgcaatgatcttgtagcatccgacagtgcagcaacaaccattatatcgggccactttgat
aagaagattcgattttgggacactcgaactgagcagtcagcgaatgaggtgccacttcaa
ggaaaaattacatcattgtctttatctcgtgatggattttacttactaagttgtgtacgt
gatgattccctcaaaatcttagatcttcggaaaaatcaagtaataaatacattcactgat
gatagcttccatgttggagcagactacacgagagcgacattttcccccgatgccatgtat
gttgcggccgggagttgtgatggtggtgtgtacatatggaatgttaatactggcaagctt
gagaagactctgagggagcactctgcctgtgtcgtggcgtgcgcttggcatcccagtgga
aaatcactcgtgtcttgtgatcgagctaaaaaagttatagcctggtcagatttttag
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