Procambarus clarkii (red swamp crayfish): 138351997
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Entry
138351997 CDS
T07930
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcla03021
]
138351997
03036 Chromosome and associated proteins [BR:
pcla03036
]
138351997
Transcription machinery [BR:
pcla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
138351997
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
138351997
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
HTH_44
HHH_3
HHH_9
S1
Tex_YqgF
Tex_N
Spt6_S1
Motif
Other DBs
NCBI-GeneID:
138351997
NCBI-ProteinID:
XP_069160269
LinkDB
All DBs
Position
52:complement(8838412..8856485)
Genome browser
AA seq
1757 aa
AA seq
DB search
MSQFIYSEAEESEEEQEEYEENERKKLKKLKTVIDDSSEEDDDDDEEKIREENKDFINDD
DEEDDEGGSGSDSEKYGKRKRRKDDEDKTNYLDDDDIDLIEENTGMKLDRKRKYKRLKRI
VDEDLDVEEEDVQGQIRREIFEGSDDEEEDGASALHPPQHPEMYASEEEESDEDNFIXDD
KTPNVKQERMAMLEPGGMKVAREIFGGDYHFEEFEQHEEWKERETDDDDHENDEKGDEGR
EHPRGRKDRGNQVKKTIFEVFEPSELERGHFTDQDHQIRKLDIPERFQLRRIPVTRTHGD
GDDRSADKELTREAKWIYHHAFFRPFISNQEGREKARHGSHKDTNTIQKIYNALDLMRNQ
TFEIPFIAFYRKEEVCPELNIRDLWKIYRWDEKWCQLKYRKENLRSLFQSMREYQGDHIT
KDPDGSHLENMRILQEEDIVRIEEIETSEQFNDYYKFFLLHYGKDQLSMRDHMNTKHRKQ
RTTPRVTRGFKEHDHGERDQNGAGIEDGKIQRKVDEYEDTEDADEYEKSGNNKNKKGSLR
ANEDVEKEVETEIEEQMEEENHESEEDSESLRRVVRKHEYELLRKAGIESLTNKFGLTAE
QFGVNLRDNYQRFDVQQWPEDPTREAKQLISKICSTLERVLEVAVKMVGWQLSYEPLIRR
TVREVYFKRARISXAVIDLLGDQFLRLKCGVEDKLLTVSFSDTIEGSTTKTYLDEMKQLY
CRDEFSQVVQDWNDLRGRAIEFAYKRIIEDLKRELSQRLLQESNDHVMEKCCSKLNNWIK
IAPYSPRDFSGEDEDWDTEKGFRVFSIAFVPDLSQAAFGCCIDIDGDCCEYIRLPHLLKR
RNAYNERDVLAKKSDIRRMQDFITRCKPHVISICGQSREALMVKEDPIQILKVLEKQERF
PKINTEIIDNDLAHIYAMSKKGEADFLDYPPLLRQAISVGRRFQDPLIEFSQLCNADEEL
LKIKFHSLQDQLNSKELLDAPYTEFVNCTNEVGVDLNRAVAHPYTQNLVQFVRGLGPRKA
NLIRNMKQNNHRLENRNQLVVNFHMGPKIFINCAGFIKIDTNALDDSDNYIDVLDSTRIH
PEAYDWARKMVFDALDYEDENGEPAEALKEILETPEKLTELDLKAFANELQNQGFGKKNT
TLYDIKRELKHRYRGFRSTYRSPTPEEVFSILTKESPETFYVGKLVQATVTNFIHRKLRR
DQADNAYPVRTEGTGLWQCPFCLKNYFPELSEVWNHFDAGDCPGQVIGIKVRLDNGISGF
ISIKNLSDKTVINPVERVRRDCLVLCRIMKIYPDKFSVDLTSRSSDLQDRNNKWKAPKDT
YYDHEAEENDLNLDRKKMDQKASRYQKRVIVHPSFRNIDYNEAEKVMQQLEQGEVIIRPS
SKGINHLTATWKVTTGICQHIDVLEQAKQYDFSLGQKLWIGNEEFDDLDEIITRHILPMA
SNVRQILEHKYYKESIMGNKEKAAELLKEEKXENPKSIPYIFSPRKDLPGKFLMSYLPRA
KVIHEFVTVNPEGFKFRQKMQFLNLAGLLNWFKQNFHRTLSGATQRMMSTGTSYMGNSTP
YLMSVDAFTIQKVAQNLNPQMLHNLSQAATNTPCSVNTSGGFSHGFSKYANTPYTPSDLT
PYATPGPSTIPRYNESQTLVPSNPTPSHQYEAAYSQHMMTKVTGHLPQPSRCGSPVSSQA
KTKDCKMAADALVEVNGATNGHNRRRMTPQCNAGNQSTPRNTNQYNVRTPRHTPQYDDHT
SRNTPRYNNQTPRLFHG
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagttcatttactcagaagcagaggaaagtgaagaagagcaagaagaatatgaa
gaaaatgaaaggaaaaaattgaaaaaactaaaaacagttatagatgattcttctgaagag
gatgatgacgatgatgaagagaaaattcgtgaagaaaataaagacttcattaacgacgac
gatgaagaggatgatgaaggaggttcggggtcagacagtgaaaagtatggcaaacgaaaa
cggcggaaggacgatgaagataaaacaaactacctcgatgatgatgatattgatcttatt
gaggagaacactggtatgaaacttgacagaaagagaaagtataagcgtttgaagaggatt
gtggatgaagacctggacgtagaagaggaagatgtgcagggtcagattcgaagagagatc
ttcgagggttcagacgatgaggaggaggatggggcctccgctctccaccctccacagcac
cctgaaatgtacgcgtcagaggaggaagagtctgatgaagataatttcattnttgatgac
aagacacccaatgtcaaacaggagaggatggctatgcttgaacctggtggaatgaaggtt
gcccgtgaaatattcggcggtgattatcattttgaggagtttgaacaacatgaagaatgg
aaggagcgtgaaactgatgatgatgaccatgagaacgatgaaaaaggcgatgagggacga
gagcatccccgaggtcgcaaggatcgcgggaatcaagtcaagaagactatctttgaggta
tttgaacccagtgaattagagcgaggccatttcactgaccaagatcatcaaatccggaag
ctggatattcccgagagattccagctgaggcggatacctgtgactcgcacccatggagat
ggtgacgatcgctcagcagataaagagctgactcgagaagccaagtggatttatcaccat
gcattcttcaggccatttatatccaatcaagaggggcgtgaaaaggcaaggcatggctcg
cacaaggatactaatactatccagaaaatatacaacgccctggacttgatgaggaaccaa
accttcgaaattccatttatagccttttataggaaggaagaggtctgccctgaattaaac
attcgtgatttatggaaaatctatcgttgggatgaaaagtggtgtcaactgaagtatcgc
aaggagaacttgcggtcactcttccagtcaatgagagaataccaaggtgatcacatcacg
aaggacccagatggttcacatctagaaaatatgcgcattcttcaggaggaggacattgta
agaattgaggagattgaaacttcagaacagttcaatgattattacaaatttttcctgctt
cactatggcaaagatcagctatcaatgcgtgaccacatgaataccaagcacaggaagcag
agaaccacaccaagagtcactaggggttttaaggagcatgatcatggtgaacgggaccaa
aatggtgctggtattgaggatgggaagatacagaggaaagtagatgaatatgaggataca
gaggatgcagatgaatatgagaagagtggtaataataaaaacaagaaaggttcattgaga
gctaatgaggatgtagaaaaagaggtggagacagaaatagaagaacaaatggaggaagaa
aatcacgaatctgaggaagactctgagtctttgagaagagttgttcgaaaacacgagtat
gaacttctgcggaaggctggtattgagtcacttacaaataaatttggcctgactgctgag
cagtttggtgtgaacctacgtgataactatcagaggtttgatgttcaacagtggccagag
gaccccacgagggaagctaagcagctcatttccaaaatatgcagcaccctagagcgagtc
cttgaagtagctgttaagatggttggttggcagctgtcttatgaacccttaataagacgc
acagttagagaagtatactttaaacgtgccagaatcagtnnagcagtcatagatctactg
ggtgaccagttccttcgtctcaaatgtggtgttgaagacaaactgttgaccgttagtttt
tccgataccattgaaggaagtacaactaagacttacctggatgaaatgaagcagttgtac
tgccgggatgagttttcccaggttgtccaagactggaatgatctgagaggccgggcaatt
gaatttgcctacaaacggattattgaagatcttaaaagggaattgtctcaacgtttgctc
caggaatcgaatgatcacgtgatggaaaagtgttgcagtaaactcaataactggataaaa
attgcaccctatagccccagagacttttctggtgaagacgaagactgggatactgaaaaa
ggcttcagagtattttctattgcatttgttccagacctttcccaggcagcatttggttgt
tgcattgacattgatggtgattgttgtgaatatattcgtctcccacatttactcaaacgg
cgcaatgcttacaatgaaagagacgttttggctaaaaaaagtgatattaggcgcatgcag
gattttattactcgctgtaaaccacatgttatttccatatgtggacagtctcgagaagct
ctcatggttaaggaagacccgattcaaattctcaaagttctagaaaaacaagaaaggttt
cctaaaataaatacagaaatcattgacaatgacctagctcacatatatgcaatgtccaag
aaaggagaagcagatttccttgattaccctccactattacggcaggctatatcagttggt
cgacgttttcaggatccattgattgaattctcgcagctatgtaatgctgatgaagaatta
cttaaaattaagttccacagtctacaggaccaattaaactctaaggaactactcgatgct
ccgtacactgaattcgtcaactgcactaatgaagttggggtcgacctaaatcgtgccgta
gcacatccatatacacagaacttggtccagtttgttcgtggtttaggaccacgaaaggcc
aaccttattaggaatatgaagcagaataatcatcgtctagaaaacaggaaccagttagtt
gtgaacttccacatgggtccaaagatattcattaactgtgcaggatttattaaaatagac
accaatgctttggatgacagtgataattatatagacgttctagattctaccagaattcat
ccagaagcttatgactgggctcgaaaaatggtttttgatgcactagattatgaagatgaa
aatggagaacctgcagaagccttgaaggaaatcttagaaactccagagaaacttactgag
cttgatcttaaagcttttgctaatgaactacagaaccagggctttggcaagaagaacaca
actttgtatgacattaaacgtgagctgaaacatagatacagaggttttaggtcaacctac
aggtctccgacgccagaagaagttttcagtatcttgactaaggagtcgccggagactttt
tatgtgggtaagcttgttcaggctaccgtcacaaattttattcatcgcaaactccgtcga
gatcaagcggataatgcctatcctgtcagaactgaaggtacaggtctttggcagtgtccc
ttctgtctaaaaaattattttcctgaactaagtgaagtgtggaatcactttgatgccggt
gattgcccaggtcaagtcataggaattaaagttcgattagataacggaatatcaggtttc
atcagtataaaaaacttgtcggataaaacggtgataaatccagtagaaagagtgagacga
gattgtttagttctttgtcgtatcatgaaaatttatcctgataaattttcagttgatctc
acgtcacgatcatcagaccttcaggaccgaaataacaagtggaaggctccaaaagacact
tattatgaccatgaggctgaagaaaatgatttaaatttggacaggaaaaagatggaccaa
aaagcaagtcggtatcaaaagcgagtgattgttcatccctccttcagaaacattgactat
aatgaagctgaaaaggttatgcagcaattggagcaaggagaggtgatcatacgaccatca
agtaaaggcattaatcatctcactgctacctggaaagttacaacaggaatctgtcagcat
atcgatgtgctggaacaagctaagcaatatgacttttctcttggtcagaaactatggatt
ggaaatgaagaatttgatgatttggatgaaattattaccagacacattttacctatggcc
agtaacgtaagacaaatacttgaacacaaatattacaaggagtctatcatgggcaataaa
gagaaagcagcagagttactgaaagaggagaaanaggaaaatccgaagtcgatcccgtat
atcttttcgcctaggaaggatttgccaggaaagtttctcatgtcatatttaccaagagcg
aaagtgatccatgaatttgtaactgtcaatcctgaaggttttaagtttaggcagaaaatg
caattcctaaatcttgccggactacttaattggtttaagcagaatttccatagaacatta
tcaggtgcaacacaaagaatgatgtccacaggcacgtcatacatgggcaactcaacacca
tatcttatgagtgttgatgccttcacaattcagaaagtggctcagaacctaaatccacaa
atgctgcataacctctcccaggcagccactaatacaccttgtagtgtcaacacttctgga
ggattctctcatggtttctcaaaatacgctaatactccttacacaccttcagatctgaca
ccgtatgccaccccggggccatccaccatacctcgctataatgaatcacagacacttgtg
ccatcaaacccaactccctcacatcaatatgaggcagcatattctcagcatatgatgacc
aaagtaactggacacttacctcagccatctcgctgtggatccccagttagcagccaagca
aaaacaaaggattgcaaaatggcagcagatgctttggtggaagttaacggtgcgactaat
ggacataatagacgaaggatgacgccacaatgcaatgctggaaaccagtcaacacctcgc
aatactaatcaatataatgtccgcacacctcgccatactcctcaatatgatgaccacaca
tctcgcaatactccacgatataataaccaaacacctcgccttttccatggttaa
DBGET
integrated database retrieval system
