Procambarus clarkii (red swamp crayfish): 138352067
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Entry
138352067 CDS
T07930
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcla03021
]
138352067
03036 Chromosome and associated proteins [BR:
pcla03036
]
138352067
Transcription machinery [BR:
pcla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
138352067
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
138352067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HHH_9
HHH_3
S1
Tex_YqgF
SH2
Tex_central_region
Spt6_S1
DUF4647
Motif
Other DBs
NCBI-GeneID:
138352067
NCBI-ProteinID:
XP_069160350
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All DBs
Position
52:8408299..8414505
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AA seq
1350 aa
AA seq
DB search
MVPRIEEIETSEQFNDYYKFFLLHYGKDQLSMRDHMNTKHRKQRTTPRVTRGFKEHDHGE
RDQNGAGIEDGKIQRKVDEYEDTEDADEYEKSGNNKNKKGSLRANEDVEKEVEIEIEEQM
EEENHESEEDSESLRRIVRKHEYELLRKAGIESLTNKFGLTAEQFGENLRDNYQRFDVQQ
WPEDPTREAKQLISKICSTPERVLEVAVRMVGWQLACEPLIRRTVREVYFKRARISSRPT
PQAVNIIDEHHSLYELKYLKDKPAIDLQGDQFLRLKCGVEDKLLTVSFSDTIEGSTTKTY
LDEMKQLYCRDEFSQVVQDWNDLRGRAIEFAYKRIIEDLKRELSQRLLQESNDHVMEKCC
SKLNNWIKIAPYNPGDFSGEGEDWDTEKGFRVFSIAFVPDLSQAAFGCCIDIHGDCCEYI
RLPHLLKRRNAYNERDALAKKSDIRRMQDFIIRCKPHVISICGQSREALMVKEDLIQILK
DLEKQERFPKINTEIIDNDLAHIYAMSKKGEADFLDYPPLLRQAISVGRRVQDPLIEFSQ
LCNADEELLNIKFHSLQDQLNSKELLDALYTEFVNCTNEVGVDLNRAVAHPYTQNLVQFV
CGLGPRKANLLIRNMKQNNHRLENRNQLVVNFHMGPKIFINCAGFIKIDTNALGDSDNYI
DVLDSTRIHPEAYDWARKMVFDALDYEDENGEPAEALKEILETPEKLSELDLKAFANELQ
NQGFGKKNTTLYDIKRELKHRYRDFRSTYRSPTPEEVFSILTKESPETFYVGKLVQATVT
NFIHRKLRRDQVDNAYPVRTEGTGLWQCPFCLKNYFPELSEVWNHFDAGDCPGPVIGIKV
QLDNGISGFISIKNLSDKTVINPAERVRRDCLVLCRIMKIYPDKFSVDLTSRSSDLQDRN
NKWKAPKDTYYDHEAEEKYLNLDRKKMDQKASRYQKRVIVHPSFRNIDYNEAEKVMQQLE
QGEVIIRPSSKGINHLTATWKVTTGICQHIDVLEQAKQYDFSLGQKLWIGNEEFDDLDEI
ITRHILPMASNVRQILEHKYYKESIMGNKEKAAELLKEEKRKNPKSIPYIFSPRKDLPGK
FLMSYLPRAKVIHEFVTVNPEGFKFRQKMQFLNLAGLLNWFKQNFHRTLSGATPRMMSTG
SSYMGNSTPYLMGVDAFTIQKVAQNLNPQMLHNLSQAATNTPCSVNTSGGFSHGFSKYAN
TPYTPSDQTPFMTPYATPGLSTIPRYNGSQTLVPSNPTPSHQYEAAYSQHMMTKVTGHLP
QPSRCGSPVSSKQKKKGLKMAADALVEVNGATNGHNRRRMTPQCNAGNQSTPRNTNQYDD
HTPRHTPQYDDHTSRNTPRYNNQTPRLFHG
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atggtccccagaattgaggagattgaaacttcagaacagttcaatgattattacaaattt
ttcctgcttcactatggcaaagatcagctatcaatgcgtgaccacatgaataccaagcac
aggaagcagagaaccacaccaagagtcactaggggttttaaggagcatgatcatggtgaa
cgggaccaaaatggtgctggtattgaggatgggaagatacagaggaaagtagatgaatat
gaggatacagaggatgcagatgaatatgagaagagtggtaataataaaaacaagaaaggt
tcattgagagctaatgaggatgtagaaaaagaggtggagatagaaatagaagaacaaatg
gaggaagaaaatcacgaatctgaggaagactctgagtctttgagaagaattgttcgaaaa
cacgagtatgaacttctgcggaaggctggtattgagtcacttacaaataaatttggcctg
actgctgagcagtttggtgagaacctacgtgataactatcagaggtttgatgttcaacag
tggccagaggaccccacgagggaagctaagcagctcatttccaaaatatgcagcacccca
gagcgagtccttgaagtagctgttaggatggttggttggcagctggcttgtgaaccctta
ataagacgcacagttagagaagtatactttaaacgtgccagaatcagtagcaggcccact
cctcaggctgtgaacatcattgatgaacatcattcactttatgaacttaaatatttaaag
gacaaaccagccatagatctacagggtgaccagttccttcgtctcaaatgtggtgttgaa
gacaaactgttgaccgttagcttttccgataccattgaaggaagtacaactaagacttac
ctggatgaaatgaagcagttgtactgccgagatgagttttcccaggttgtccaagactgg
aatgatctaagaggccgggcaattgaatttgcctacaaacggattattgaagatcttaaa
agggaattgtctcaacgtttgctccaggaatcgaatgatcacgtgatggaaaagtgttgc
agtaaactcaataactggataaaaattgcaccctataaccccggagacttttctggtgaa
ggcgaagactgggatactgaaaaaggcttcagagtattttctattgcatttgttccagac
ctttcacaggcagcatttggttgttgcattgacattcacggtgattgttgtgaatatatt
cgtctcccacatttactcaaacggcgcaatgcttacaatgaaagagacgctttggctaaa
aaaagtgatattaggcgcatgcaggattttattattcgctgtaaaccacatgttatttcc
atatgtggacagtctcgagaagctctcatggttaaggaagacctgattcaaattctcaaa
gatctagaaaaacaagaaaggtttcctaaaataaatacagaaatcattgacaatgaccta
gctcacatatatgcaatgtccaagaaaggagaagcagatttccttgattaccctccacta
ttacggcaggctatatcagttggtcgacgtgttcaggacccattgattgaattctcgcag
ctatgtaatgctgatgaagaattacttaacattaagttccacagtctacaggaccaatta
aactctaaggaactactcgatgctctgtacactgaattcgtcaactgcactaatgaagtt
ggggtcgacctaaatcgtgccgtagcacatccatatacacagaacttggtccagtttgtt
tgtggtttaggaccacgaaaggccaaccttcttattaggaatatgaagcagaataatcat
cgtctagaaaacaggaaccagttagttgtgaacttccacatgggtccaaagatattcatt
aactgtgcaggatttattaaaatagacaccaatgctttgggtgacagtgataattatata
gacgttctagattctaccagaattcatccagaagcttatgactgggctcgaaaaatggtt
tttgatgcactagattatgaagatgaaaatggagaacctgcagaagccttgaaggaaatc
ttagaaactccagagaaacttagtgagcttgatcttaaagcttttgctaatgaactacag
aaccagggctttggcaagaagaacacaactttgtatgacattaaacgtgagctgaaacat
agatacagagattttaggtcaacctacaggtctccgacgccagaagaagttttcagtatc
ttgactaaggagtcgccggagactttttatgtgggtaagcttgttcaggctaccgtcaca
aattttattcatcgcaaactccgtcgagatcaagtggataatgcctatcctgtcagaact
gaaggtacaggtctttggcagtgtcccttctgtctaaaaaattattttcctgaactaagt
gaagtgtggaatcactttgatgccggtgattgcccaggtccagtcataggaattaaagtt
caattagataacggaatatcaggtttcatcagtataaaaaacttgtcggataaaacggtg
ataaatccagcagaaagagtgagacgagattgtttagttctttgtcgtatcatgaaaatt
tatcctgataaattttcagttgatctcacgtcacgatcatcagacctgcaagaccgaaat
aacaagtggaaggctccaaaagacacttattatgaccatgaggctgaagaaaaatattta
aatttggacaggaaaaagatggaccaaaaagcaagtcggtatcaaaagcgagtgattgtt
catccctccttcagaaacattgactataatgaagctgaaaaggttatgcagcaattggag
caaggagaggtgatcatacgaccatcaagtaaaggcattaatcatctcactgctacctgg
aaagttacaacaggaatctgtcagcatatcgatgtgctggaacaagctaagcaatatgac
ttttctcttggtcagaaactatggattggaaatgaagaatttgatgatttggatgaaatt
attaccagacacattttacctatggccagtaacgtaagacaaatacttgaacacaaatat
tacaaggagtctatcatgggcaataaggagaaagcagcagagttactgaaagaggagaaa
aggaaaaatccgaagtcgatcccgtatatcttttcgcctaggaaggatttgccaggaaag
tttctcatgtcatatttaccaagagcgaaagtgatccatgaatttgtaactgtcaatcct
gaaggtttcaagtttaggcagaaaatgcaattcctaaatcttgccggactacttaattgg
tttaagcagaatttccatagaacattatcaggtgcaacaccaagaatgatgtccacaggc
tcgtcatacatgggcaactcaacaccatatcttatgggtgttgatgccttcacaattcag
aaagtggctcagaacctaaatccacaaatgctgcataacctctcccaggcagccactaat
acaccttgtagtgtcaacacttctggaggattctctcatggtttctcaaaatacgctaat
actccttacactccttcagatcagacaccattcatgacaccgtatgccaccccagggctt
tccaccatacctcgctataatggatcacagacacttgtgccatcaaacccaactccctca
catcaatatgaggcagcatattctcagcatatgatgaccaaagtaactggacacttacct
cagccatctcgctgtggatccccagttagcagcaagcaaaaaaaaaaaggattgaaaatg
gcagcagatgctttggtggaagttaacggtgcgactaatggacataatagacgaaggatg
acgccacaatgcaatgctggaaaccagtcaacacctcgcaatactaatcaatatgatgac
cacacacctcgccatactcctcaatatgatgaccacacatctcgcaatactccacgatat
aataaccaaacacctcgccttttccatggttaa
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