Procambarus clarkii (red swamp crayfish): 138353990
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Entry
138353990 CDS
T07930
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04145
Phagosome
pcla04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
138353990
09142 Cell motility
04814 Motor proteins
138353990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcla03036
]
138353990
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pcla04812
]
138353990
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
138353990
Cytoskeleton proteins [BR:
pcla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
138353990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WDR55
WD40
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_IFT140_1st
Beta-prop_EML_2
Beta-prop_HPS5
EIF3I
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IP5PC_F
WD40_RFWD3
Beta-prop_SPT8
RepB_primase
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
138353990
NCBI-ProteinID:
XP_069163758
LinkDB
All DBs
Position
60:complement(19859610..19887464)
Genome browser
AA seq
557 aa
AA seq
DB search
MRKSTHFYPVFSLTPAHAFDYYDEYNLNPALEWDDEFTVLTYDDPQAEEEDNSLTMLDTP
PIYGGGHNRHLPPGILPTGMPTVQDVKPALATEAEKKMEEEKPQPPRELSDEEKQMLMMT
EEFHSFFDRTTRVMERALAEDANLFVDYSHDYEEDGEANENGGIKLSLNRWFFDERWSRN
RCITCMDWSPQYPELLVASYNNNEDSPHDPDGVALVWNTKFKKDTPEYIFHCQSPVMSAT
FARFHPNLIIGGTYSGQIVLWDNRSQKRTPVQRSPLSASAHTHPVYCMKVVGTQNAHNLI
SVSTDGKMCSWSLDMLSQPQESMELQHKQSRAVAVTCMAFPHGDVNNFIVGSEEGAVFTA
CRHGSKAGIVDAYEGHQGPVTGISTHSTPGPIDFSHLFLTSSIDWTVKLWSVKHWSMKET
KPLYSFEDNGDYVYEVAWSPIHPALFTTVDGSGRIDLWNLNQDTEVPTASTVVEGSPALN
RVSWTNSGQQITVGDDMGKIWIYDVGEQLALPRADDWARLVHTMGELKNNQADDDQSTRH
YDSSFSSLTSLSSSPLR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaagtactcacttttaccccgtcttctccctcaccccagcccatgccttcgac
tattacgacgaatataatctaaacccagcgctagaatgggatgatgaattcacagttctc
acctatgatgacccgcaagctgaagaggaggacaattcactgaccatgctggatacaccg
ccaatatacggagggggccataaccgtcacctgccgccagggatactccccactgggatg
cctacggtgcaagatgtaaagccagcattagcaacggaagcagagaagaaaatggaagaa
gagaagccacaaccaccacgagaattgtcagacgaagagaaacagatgctgatgatgacg
gaagaatttcacagtttctttgatcgtaccacacgtgttatggaacgagccttggctgaa
gatgccaacctctttgtggattattcacatgactatgaagaggatggagaagcaaatgaa
aatggcggaataaaattgtctttgaatcggtggttcttcgatgagaggtggtctcgtaac
cgttgcatcacgtgcatggattggtcccctcagtacccagaactgttagtggcaagctac
aacaataatgaggactctccacacgatcctgatggtgttgctctagtttggaacaccaag
ttcaagaaggacacgccagaatatatctttcactgccagtcccctgtaatgtctgctact
tttgccaggtttcacccaaatcttatcattggaggtacttactcagggcagattgtttta
tgggataaccgcagtcagaagcgaactccagttcaacggagccccctctccgcctctgct
cacactcatccagtgtactgcatgaaggttgttggcacacagaatgctcacaacctgatc
agtgtgagcaccgatggtaagatgtgctcgtggtcccttgacatgctgtcacaaccacag
gagtctatggaactgcaacacaaacaatcccgggctgttgctgtaacttgcatggccttt
ccacatggtgatgtcaacaacttcatcgtaggatcagaagaaggagcagtctttactgct
tgccgccacggaagtaaagccggtatcgtggatgcctatgaggggcaccagggtcctgtg
acgggcataagcacccattcaacccctggtcccatcgatttctctcatctcttcctcact
tcttccattgactggacagtcaagttatggtcagtgaagcattggtcaatgaaggaaacc
aaaccactgtattcatttgaagacaatggggattatgtgtacgaagtagcctggtcacca
atccacccggctctcttcactacggtggatggctcggggagaatcgatctttggaacctg
aatcaagataccgaggtgccaactgctagcacagttgttgagggcagtccagcattaaac
agggtgtcttggacaaattctggtcaacaaataacagttggagatgacatgggcaagatc
tggatctatgatgttggagagcaactagccttaccacgtgcagatgactgggctcggctt
gttcacactatgggtgagcttaagaacaaccaagctgatgatgaccaatccactagacac
tatgactcgtcgttttcgtcgcttacgtcactttcgtcgtctcctctcagataa
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