Procambarus clarkii (red swamp crayfish): 138354269
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Entry
138354269 CDS
T07930
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX8-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138354269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcla03041
]
138354269
Enzymes [BR:
pcla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138354269
Spliceosome [BR:
pcla03041
]
Complex C
Other components
Step II factors
138354269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
nSTAND3
AAA_19
AAA_30
PhoH
Motif
Other DBs
NCBI-GeneID:
138354269
NCBI-ProteinID:
XP_069164328
LinkDB
All DBs
Position
62:17022431..17036151
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AA seq
1239 aa
AA seq
DB search
MMPSLTAISCNDNIKEEINKPSTEKDKKRALLPFLALPNDPKVIHMLDNELKPEIKMKEE
VPEVDTSKDKEKDWEKRKEKRKKRDKDCEKDREKPDKKVKREPEREVDDLMAFLESHAPS
KQNEVSRSRSRSRDKKRRSRSRDRKRNCSDSKEKEKCDREQKKSRSQERHKNRRDRSHSR
ERERRHRSQSREKERRHRSQSRERERRNRSHSRDRDRKANDYERDNNRERHYDRKDRERR
ERSRSRGRDKHSRHSRSKSREKDLNRNRMGNREVFINRPPDENPVVGKVYEGKVTNILNF
GCFVQLEGLRRRLEGLVHISQLRQEGRVTNVSDVVMRGQKVKVKVLSFTGQKTSLSMKDV
DQGTGEDLNPNVAPLGSNSQEEDAMRNPDRPMSLMELTKGTDEEDLATYKRVNRISSPER
WELKQMMAASCISKSEMPDFDEEQGVMGGEDDDEEDVEIELVEEEPAFLRGYGRVREELS
PVRIMKNPDGSLAQAAMMQSALAKERREIKMAQREXEMDSQPSNLGQNWNDPLPETQRND
PAMSRGLPTQQEVPEWKRHITGGTRGSYGKKTNMSLLEQRQSLPIYKLRDQLIKAIDDNQ
ILIVVGETGSGKTTQMTQYLAEAGFTAKGKIGCTQPRRVAAMSVAKRVSEEFGCRLGQEV
GYTIRFEDCTSSETVIKYMTDGMLLRECLIDPDMSCYACIMLDEAHERTIHTDVLFGLLK
QAVDKRPELKLIVTSATLDAVKFSEYFNQAPIFTIPGRTFPVEILYTREPETDYLDAALI
TVMQIHLAEPPGDVLVFLTGQEEIDTACELLYERMKALGSDVPELIILPVYSALPSEMQT
RIFEPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNPKTGMDSLMVTPVSQA
GAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTSVPEIQRTNLAATVLQLKAMGINDLLG
FDFMDPPPTDAMVMALETLHSLSALDDEGLLTRLGRRMAEFPLDPNLSKMLIMSVHLQCS
DEILTIVSMLSVQNVFYRPKEKQALADQKKAKFNQAEGDHLTLLAVYNSWKNNKFSNAWC
YENFVQMRTLKRAQDVRKQLLGIMDRHKLDVVSCGKNVARAQKAICSGFFRNAAKKDPQE
GYRTLVDSQVVYIHPSSALFNRQPEWVVYHELVQTTKEYMREVTTIDPKWLVEFAPSFFK
QGDPTKLSKYKKNQRLEPLYNKYEEPNAWRISRVRRRRN
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgatgccttccctaacagcaatttcatgtaatgataatataaaagaagaaataaacaag
ccttcaactgagaaagacaagaaaagagcactactgcctttcttagctttgccaaatgat
ccaaaggttattcatatgctggataatgaacttaaacctgaaataaaaatgaaagaagag
gttcctgaagtagacacaagcaaagataaagagaaggactgggagaaaaggaaggagaaa
aggaagaaaagggacaaagattgtgaaaaagatagagaaaagccagacaaaaaagtgaaa
agggaacctgaaagagaggtagatgatctcatggcctttctagagtctcatgctccatcg
aagcaaaatgaagtgtcaagaagcagaagtaggagcagagacaaaaagaggaggtcaagg
tccagagacagaaagagaaattgtagtgacagcaaagagaaagaaaaatgcgatagagaa
caaaaaaaatcaagaagtcaagaaaggcataaaaatcgaagagatcgaagtcacagccga
gaaagagagagaagacatcgcagtcagagcagggagaaagagagaagacatcgcagtcag
agtagggagagagagagaagaaatcgtagtcatagtcgagatagggacagaaaagctaac
gattatgaaagagacaataatcgagagaggcactatgacaggaaggatcgagagagaaga
gaacggagtaggtctcgaggccgagataaacacagcaggcacagcaggagcaagagtcgg
gaaaaagatctaaataggaatcgaatgggcaatagggaggtgtttatcaatcgtcctcct
gatgaaaatcctgtagttggtaaggtatatgagggtaaagtaacaaacatcttgaacttt
ggctgctttgtgcagctagaaggcctacggcgccggcttgagggtctcgtacatatttca
cagctgcgacaggagggtcgtgttactaacgtgtctgatgtcgttatgcggggacaaaaa
gtcaaggtcaaggtgttgtcgtttaccggtcagaagacgtcactgtctatgaaggatgtt
gaccaggggacgggtgaagacctcaaccccaatgttgctcctcttggtagtaacagccag
gaagaagatgctatgaggaacccagatagacccatgtccctcatggaactgactaaaggt
accgatgaagaagatctagcgacatacaagcgagttaaccgaatttcttcacccgagaga
tgggaactgaaacagatgatggctgccagctgcatcagtaaatcagaaatgccagacttt
gatgaggagcagggagtgatgggtggtgaagatgatgatgaagaagatgtggagattgaa
cttgtagaagaagaacctgcgttcttacggggttatggcagggtgagggaagaactgagt
ccagtacgaatcatgaagaaccccgatggctcactagctcaagcagcaatgatgcaaagt
gctcttgcgaaagagcgtagagaaataaagatggctcagagagaangtgaaatggattct
cagccatctaatcttggccaaaattggaatgatcctctacctgaaactcagcgcaacgac
ccagccatgtcgcgtgggttgcccacccagcaggaagtgccagaatggaagagacacatt
acaggtggaactagaggctcatatggaaagaaaaccaatatgtcacttttagaacaacga
caaagtctacctatttataaactacgagaccagcttatcaaggccattgatgacaaccag
atcctcattgttgttggtgaaacaggctctggcaagacaacacagatgactcagtacctc
gcagaggcaggttttactgctaaaggaaaaattggatgcacccagccaagaagagtggca
gccatgtcagttgctaagagagtctctgaagaatttgggtgtagactgggacaggaagtt
ggttataccattcgttttgaggattgcacaagctcagagacagttatcaaatacatgact
gatggtatgttactaagagaatgccttattgacccagatatgtcatgctatgcttgcatc
atgttggatgaagctcatgaaaggactattcatacagatgttttgtttggtcttttgaag
caagcggtggataaaagacctgaacttaaacttatagtcacctcggccaccttagatgct
gttaagttctcggagtacttcaaccaagccccaatcttcacaattcctggtagaacattc
ccggtagaaatattatacacaagggaaccagaaacagattatcttgatgcagctcttata
actgtaatgcagattcatcttgctgaaccgccaggagatgtacttgtctttctcactggt
caagaggagattgacactgcgtgtgaacttttgtacgaacgcatgaaagcccttggaagc
gatgtaccagagcttattattttacctgtatattcagcattgccctctgaaatgcaaaca
agaatatttgaaccagcaccaccaggatcacgaaaggttgtaattgccaccaacattgct
gagacatctctcacgattgatggcatctattatgtggtagatccaggttttgtaaaacaa
aaagtatacaaccccaagactggtatggactcactgatggtcacaccagtttcccaggct
ggagctaagcagcgagcaggtcgtgctggacggacaggccctggaaaaacctatagactt
tacactgaacgtgcttacagagatgaaatgttgccaacaagtgtaccagagattcagcgg
accaatctagctgcaactgtactgcagttaaaagcaatggggatcaatgacctgctgggt
tttgactttatggatcctccaccaacagatgccatggtcatggctctcgagactcttcac
tctcttagtgcattggatgacgagggtttgctaacccgactgggtagaagaatggctgaa
tttcctcttgatcccaacctttcaaagatgctgattatgtcagtacacttacagtgttca
gatgaaatcctcacaattgtttccatgttatctgtgcaaaatgtattttatcgacctaaa
gaaaaacaagctttagctgaccagaagaaagccaaattcaaccaagctgagggagatcat
cttacacttcttgcagtgtacaactcttggaaaaacaacaaattctccaatgcttggtgc
tatgaaaactttgttcagatgcgtacactcaaaagagctcaagatgttagaaagcaatta
cttggtattatggacagacataaactggatgttgtgtcatgtggcaagaacgtggctaga
gcccagaaagcaatttgctccgggttctttcgaaatgcagcaaagaaggatcctcaggag
ggctacagaacacttgtagactcccaggtagtctatattcacccttcgtcagccctcttt
aatagacaaccagaatgggtagtgtatcatgaactggtgcagacaacgaaggagtacatg
cgtgaggtaacaacaatagatcccaagtggttggtagagtttgccccatccttctttaag
caaggcgatccaaccaagctcagcaagtacaagaagaaccagagacttgagcccttgtat
aataagtatgaagaacccaatgcttggagaatatccagagttaggaggaggaggaactga
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integrated database retrieval system
