Procambarus clarkii (red swamp crayfish): 138356459
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Entry
138356459 CDS
T07930
Name
(RefSeq) general transcription factor IIF subunit 2-like
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138356459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcla03021
]
138356459
Transcription machinery [BR:
pcla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
138356459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
DUF3591
Motif
Other DBs
NCBI-GeneID:
138356459
NCBI-ProteinID:
XP_069168717
LinkDB
All DBs
Position
72:24028557..24033490
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AA seq
398 aa
AA seq
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MSQQSKMDLDITNCSRGLWLVKVPKYLGDKWADCAGHDVGKLKITKVPGKPPTITFKSSE
HTLKDGKIPREHKVISHSLKEMTLGVLSEPDLGSSSSDAAVSETQQLSFEGQVIHKLECQ
PVVDDYYMNQKREAVKKAAQSLHTVKLIDRPLNGYKPISHHKHNVYLEQKKKAEGKTIRD
DKDKVMELLFAAFEKHQYYNIKDLHKITRQPITYLKEILKDLCNYNVKNPHKNMWELKPE
YRHYKLAEKAPRPLLCPVFQTVQYQDEWQNVTEIVVFPINQILLNTVFQVSDVPVTSVTV
QTVTAPALQLKKKAEGKTIRDDKDKVMELLFAAFEKHQYYNIKDLHKITRQPITYLKEIL
KDLCNYNVKNPHKNMWELKPEYRHYKLAEKAVENSMYD
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacagtctaagatggacttggatattacgaattgcagccgtgggctgtggctg
gtcaaggtacctaaatatttgggggacaaatgggcagactgtgctggccatgacgttgga
aagcttaagattaccaaggtgcctggtaaacctccgacaataacctttaaatctagtgaa
cacaccttgaaggacgggaaaattcctcgggagcacaaggtaatttctcatagtttaaaa
gaaatgacactcggagttctttctgaaccagatctcggtagcagcagctcggatgctgca
gtttccgagacacagcaattgtcctttgagggacaagtcatccacaaactagaatgtcag
cctgtagtggacgactactatatgaatcagaaaagggaagctgtgaagaaagctgcccag
tctcttcatacggtaaagcttattgacagacccctcaacggctataagcctatttcacac
cataaacataatgtttatttagagcagaagaagaaggcagaaggcaagacgattcgtgat
gataaagataaggtcatggagttgttgtttgctgcatttgaaaagcatcagtattacaat
attaaggatctccacaagattacccgacaaccaatcacatatctaaaggagatcctgaaa
gacctatgtaactataatgttaagaatcctcacaagaatatgtgggaactcaagcccgag
taccgtcattacaagcttgccgaaaaggctccacggccgctgctctgtcccgtcttccag
actgtgcagtatcaggacgagtggcagaatgtcacagagatcgtggtgtttcccatcaac
cagatcctcctcaacaccgtgttccaagtcagtgatgttcccgtgacctccgtcacagtc
cagacggtgacggcaccagccctgcagctgaagaagaaggcagaaggcaagacgattcgt
gatgataaagataaggtcatggagttgttgtttgctgcatttgaaaagcatcagtattac
aatattaaggatctccacaagattacccgacaaccaatcacatatctaaaggagatcctg
aaagacctatgtaactataatgttaagaatcctcacaagaatatgtgggaactcaagccc
gagtaccgtcattacaagcttgccgaaaaggctgtggaaaattcaatgtatgattag
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