Procambarus clarkii (red swamp crayfish): 138358269
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Entry
138358269 CDS
T07930
Name
(RefSeq) DNA repair nuclease APEX1-like
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
138358269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcla03400
]
138358269
Enzymes [BR:
pcla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
138358269
DNA repair and recombination proteins [BR:
pcla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
138358269
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
138358269
NCBI-ProteinID:
XP_069172186
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All DBs
Position
82:9581433..9591683
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AA seq
348 aa
AA seq
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MRGVWSVATGMRGVWSVAQGVSVATAARGASGQAPQFRGSQLHRLVRSAASLTSMPPKRK
QESVEDGEEKKGTKIVKKEDFSSDAKTEEGEKWNLKVVSWNVDGIRAWLKKDGMSVFELE
KPDIVCLQETKCAEAKLPDVVKNIKGYKSYFMSSKTEGYSGVALFSKIEPLKVTYGFSDK
THDDEGRCITAEYDKFYLVTTYVPNAGRKLVTLDKRLDWNTKFHKYLQDLDAKKPVIMCG
DLNVSHKEIDLANPKGNKKNAGFTKEEREGFTDLLEMGFVDSFRHLYPDATSKYTFWTYM
FNCRAKNVGWRLDYFVLSKRLVPQLCDSLIRDSLYGSDHCPVTLLMHM
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtgtatggagtgtggccacagggatgcgcggtgtatggagtgtggcccaaggc
gtgagtgtggccacagcagctaggggagcgagcggccaggcgccacagttcaggggttca
cagctacatagactcgtgcgttccgcagcttctctcacttccatgccgcccaagaggaaa
caggaaagtgttgaggatggagaagagaagaaaggcaccaaaatagtaaagaaggaagat
ttttcatcagatgcaaaaacagaagagggcgagaaatggaatctgaaggtggtctcttgg
aatgttgatggcattcgtgcttggctaaagaaagatggaatgtcagtgtttgaacttgag
aaacccgacattgtgtgccttcaggagaccaagtgtgccgaggccaaactaccagatgta
gtcaagaatatcaagggttacaagagctacttcatgtcttctaaaacagaagggtattca
ggtgtggcactcttttccaagatcgagccacttaaagtgacttacggcttcagtgacaag
acacatgatgatgagggacgctgtattactgcagaatatgacaaattttatttagtcact
acttatgttccaaatgcaggaagaaagcttgtcacactggacaaaaggttggactggaac
acaaaatttcacaagtacctacaagaccttgatgcaaagaagccagtcatcatgtgtggc
gacctcaacgtgtcgcacaaggaaattgatttggcaaatccaaaggggaacaagaagaat
gctggattcaccaaggaagaaagagagggattcacagatcttttagaaatgggttttgtg
gactcattcagacatttataccctgatgcaacttcaaaatacacattttggacctacatg
tttaactgcagggccaaaaatgttggatggcgactggattactttgtcctctccaaacgc
ttggtccctcagttgtgtgacagtctcatccgtgactcactttatggctcagatcactgc
cctgtcactctgctaatgcacatgtga
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