Procambarus clarkii (red swamp crayfish): 138359448
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Entry
138359448 CDS
T07930
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138359448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcla03021
]
138359448
03019 Messenger RNA biogenesis [BR:
pcla03019
]
138359448
Transcription machinery [BR:
pcla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
138359448
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
138359448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCHC
zf-CCCH_4
zf-CCHC_3
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
138359448
NCBI-ProteinID:
XP_069174710
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All DBs
Position
91:1743795..1754745
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AA seq
276 aa
AA seq
DB search
MMEVIVANVDKITFDIETQLEEQVGAQMLPFPGMDKSIAAVCTFYMRGNCSKSVNCPFRH
VRGDRTVVCKHWLRGLCKKGDQCEFLHEYDMSKMPECYFYSRFNACHNKECPFLHINPDM
KMKDCPWYDRGFCRHGPQCRNRHVRRVLCMNYFSGFCPDGSGCKFMHPRFELPQIMEDKQ
LPHKKQGITCHYCGEAGHKASHCYKANPELREQNAIISLASGGPRNQPGKENSGPPPMHQ
MDNNRLDNVICFKCGQQGHFANRCSKGQFAFLSSSN
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggtaattgtagcaaacgtggacaagataaccttcgatatagagacacagctg
gaggagcaagtgggggcacaaatgctgcccttccctggcatggacaaatcaatagctgca
gtgtgcacattttacatgcgtgggaactgcagcaaaagtgtcaactgtcccttccgtcat
gttcgcggagacaggactgtggtttgcaagcattggcttcgtggattgtgcaaaaagggt
gaccagtgtgaatttctccacgagtatgatatgtcaaaaatgccagaatgctacttctac
tctcgtttcaatgcctgtcacaataaggagtgtcctttcctacacataaacccagatatg
aaaatgaaagactgtccgtggtatgatagaggattttgccgtcatggtcctcagtgtcgc
aatcgtcatgtacgacgagtcctctgcatgaattatttctcgggcttctgtccagatgga
tcaggttgcaaatttatgcacccaagatttgagttgccacagataatggaagacaaacaa
ttgcctcataaaaaacaggggatcacttgtcattactgtggagaagctggacacaaagca
tcacactgctacaaagctaatccagaactaagggagcaaaatgcaatcattagtttggct
tcaggtgggccaaggaaccaaccaggcaaagaaaattcaggcccgcccccaatgcaccaa
atggataacaatcgtttggataatgtcatttgcttcaagtgtggtcagcaaggacacttc
gctaacagatgttctaagggccagtttgctttccttagttccagtaattag
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