Procambarus clarkii (red swamp crayfish): 138364058
Help
Entry
138364058 CDS
T07930
Name
(RefSeq) LOW QUALITY PROTEIN: protein CASC3-like
KO
K14323
protein CASC3
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03013
Nucleocytoplasmic transport
pcla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138364058
03015 mRNA surveillance pathway
138364058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
138364058
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
138364058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Phlebovirus_G2
Motif
Other DBs
NCBI-GeneID:
138364058
NCBI-ProteinID:
XP_069179586
LinkDB
All DBs
Position
1:complement(24856255..24880604)
Genome browser
AA seq
831 aa
AA seq
DB search
MRNFFLSFQGSDGGECETANEEELGEEEEEEEDELIIMPDGLVLGEDNKPLDDDEDRKNP
QYIPKKGTFYEHDDRTAAEDDVEKPVEEPVVKKEVGKKKVWKEDDKWNHDKFNEFDQSPK
SREEIMAIYGYDIRNEGPPKAHCRRRYGRGPNKYTRNWKDLDAYSKPVRGSIRGGPGRGG
PRSLHGSRKTLDNDEEFPVLNSPQYKKHEGDKYNDLNKFESPVTRSEVPGAIVDNLHTGD
NENYKPEQTAPLASPQQQLPPQYHQQQQQQQQQQQQQQQQQLHKISGFSPQPQDVCADGY
GGRGRGYRGSGRGYNRGRGYNREREQHRYNEDSWGQYYQDNCPSGRGNYRGGHQQRLPQP
HTPHTPRDIEEITAMLKNISISSQNRKEPFRNKNRGGGGNVDNRRNTMPPRLQESAAAAA
NMQGRGNRGGNASPDGDSSSSRPKRYSSQRQRSIPGQQVSPFPPQHGYMDPSVDAGYQGG
VNDGGIVTSAGHTVTAPHTQHPLAGGAPPTFVPPAFTTSPPTFPPEPFLGRPPAPRMFPP
VTQSPHLFGPPVAPPVPVPPVGGPPPVAGPLGAPPVGAPPVPGPPVTGPPFLPPENMINF
GAHPGPLPGAAPHPPQFPPFQGYTPGPVSQPGEIYSNGVTYYNTESQQHLPRSIPPLQKS
PKAAIPIVPPPEXENKKDGMSLTQDETSAPIVLESRVQDHEEPTSKEQSTSNGHTVLQDD
PKEEYVMPLDSSSNDGVCQSQQPSQPETLELECKEVLQKDIASCDTHSQLDTNIETTLDV
VSVKVESSENNIRSSKESLPVSVESLPTEQNNEAVTSGHILETPDTAVAAS
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgaggaattttttcttgtctttccagggaagtgatggaggtgagtgtgaaactgctaat
gaggaagagcttggggaagaggaggaggaggaagaggatgagctcattataatgccagat
ggtcttgtattaggggaggacaacaagccattagatgacgatgaggatcggaaaaaccct
cagtatatccccaagaaaggaactttttatgagcatgatgaccggaccgctgccgaagac
gatgtagagaaaccggttgaagaaccagtcgttaaaaaggaagttggtaagaagaaagtt
tggaaagaggatgataagtggaaccatgacaaatttaatgagtttgaccaatctcccaag
tcccgggaagagataatggctatatatggttatgatatacgtaatgaaggtcctccaaaa
gctcattgtagaaggcgttatggtcgtggaccaaacaaatatacacgcaattggaaggat
ttggatgcctactccaagcctgttcgtggttccatacgcggaggtcctggaagaggtggg
cccaggtctttgcatggcagccgaaaaactctagacaacgatgaagaattcccggtattg
aattctccacaatacaaaaaacacgaaggcgataaatataatgacctcaacaagtttgaa
tctcctgtgacaagatcagaagtgccaggagcaattgttgacaatttgcatacaggtgat
aatgaaaattataaaccagaacaaacggcaccattagcctcaccacagcagcagttacca
ccgcagtatcatcagcagcagcagcagcagcaacaacagcagcagcaacaacaacagcag
cagctacacaagatctcaggttttagtccacaaccccaagatgtatgtgctgatggctat
ggtggacgtggcagaggttacagaggttctggtagaggttacaatcgtggcagaggctat
aatcgagaacgtgaacaacatagatataatgaggacagttggggccagtattaccaagac
aattgtcccagtggccgtggtaattatagaggcggacaccagcagcgtttaccccaacca
catactccccatacacccagagatatagaagaaataacagcaatgttaaagaacatcagt
atcagttcacaaaatagaaaagagccgttcaggaacaaaaatcgtggtggaggtggaaat
gtggataacagacgcaacacaatgcctccacgactgcaggaatcggccgctgctgcagcc
aacatgcaaggtcggggaaacagaggtggtaatgcatctcctgacggagatagctcatct
tctagaccaaaaagatactcgtctcaaagacaacgctccattcctgggcagcaagtttca
cccttcccaccgcaacatggttatatggatccatctgtagatgcaggctaccagggagga
gtaaatgatggaggcattgtgacatcagcaggtcacacagtgacagctcctcatacccag
catccattggctggtggtgctcctccaacctttgttcctccagcctttacaacttcacct
ccaactttcccaccagaacctttcttaggacggcctcctgcacctcggatgttcccgcca
gtcacacagtcaccacacctctttggtcctccagtggcgccgcctgtgcctgttccacct
gtgggtggtccacctccagtggcaggtcctctaggtgctcctccggtgggtgcaccccca
gtccctggtcctccagttactggcccaccattcttaccccctgagaacatgattaatttt
ggagctcatcccggtcctctcccaggggctgctcctcacccacctcagttcccgccattc
cagggttacactcctggtcctgtgtcacagcctggagagatctacagcaatggagtgaca
tattacaacactgagagtcagcagcatctaccaagaagtataccaccattgcagaaaagc
ccgaaggcagcaattccgatagtgccaccccctgaannagagaataagaaggacggaatg
tctcttacccaagatgaaacttcagcaccaattgtcctggaaagtagggtgcaagatcat
gaagaacccactagtaaagaacagtccactagtaatggtcacactgtgcttcaggatgat
cccaaggaagaatatgtcatgcctctagattcttctagcaatgatggtgtgtgtcaatcc
cagcaaccatcacagccagaaacgttagagctagaatgcaaggaagttttgcagaaggat
attgcatcatgtgacactcattcacagctggacactaatatagaaaccaccttagatgta
gtttctgtgaaagtagaatcatctgaaaacaatataaggtcatccaaggaatccttaccc
gtgtcagtagaatctttacctactgagcaaaataatgaagcagtaacatctggtcacata
ttggaaacacctgacacagcagtagcagcttcataa
DBGET
integrated database retrieval system
