Procambarus clarkii (red swamp crayfish): 138364087
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Entry
138364087 CDS
T07930
Name
(RefSeq) pre-mRNA-splicing factor 38-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138364087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcla03041
]
138364087
Spliceosome [BR:
pcla03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
138364087
Complex C
U4/U6.U5 tri-SnRNP related factors
138364087
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
138364087
NCBI-ProteinID:
XP_069179588
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Position
12:50903645..50905377
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AA seq
265 aa
AA seq
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MANRTIREARATHGTNPQYLVEKIIRTRIYDSRYWKEECFALSAELLVDKAIALRCIGGV
HGANSIPTPFLCLVLKMLQIQPETDIIIEFITQEDFKYARVLGAFYLRLVCGSLNCYKYL
EPLLNDFRKLRVIDRSGQFQFTHMDEYIDCLLRDECSCDIILPRIQKRPIHEANNELKGR
VSVLNDDLDNHERESDEEDIFPPPRPRNDPVEPSRTTLCDDQDGRGHSSSPHRGLPCDRE
REKLRRSHSQKTDHERGTSAFVQLP
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccgcacgatcagggaagcccgggccactcacggcacaaacccccagtattta
gttgagaaaattataagaactaggatatacgactctagatactggaaagaagaatgcttt
gccctctcggcggaattactagtcgacaaagcaatagccctcaggtgtattggtggtgtt
cacggagccaacagcatacccacgccattcctatgtctcgtgctaaagatgctccagatc
caacctgagactgacataattatagaattcatcacacaagaggattttaagtatgctcgt
gttttgggggcattttacttgagacttgtatgtggatcactgaattgttacaaatacctg
gaacctctccttaatgactttaggaaactacgcgttattgaccgttccggccagttccag
tttactcacatggatgaatatattgattgtttattaagagatgaatgttcatgtgatata
attttaccgaggatccaaaagagaccgattcatgaagccaacaacgagcttaaaggtcga
gtatccgtattaaatgatgatttggacaaccacgagagagaaagtgatgaggaggacatc
tttcctccaccaagaccaagaaatgatccagtagagccatcccgaacaacactctgtgac
gaccaggatggcagaggccactctagctccccacaccgaggccttccatgtgacagagaa
agagaaaagcttcgcagaagtcactcacagaagacagatcatgaaagaggtacatctgca
tttgtgcagctaccctag
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