Procambarus clarkii (red swamp crayfish): 138364441
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Entry
138364441 CDS
T07930
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03030
DNA replication
pcla03410
Base excision repair
pcla03420
Nucleotide excision repair
pcla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
138364441
03410 Base excision repair
138364441
03420 Nucleotide excision repair
138364441
03430 Mismatch repair
138364441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcla03032
]
138364441
03036 Chromosome and associated proteins [BR:
pcla03036
]
138364441
03400 DNA repair and recombination proteins [BR:
pcla03400
]
138364441
DNA replication proteins [BR:
pcla03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
138364441
DNA Replication Termination Factors
ELG1-RFC complex
138364441
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
138364441
DNA repair and recombination proteins [BR:
pcla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
138364441
Check point factors
HRAD17(Rad24)-RFC complex
138364441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
AAA_2
DUF87
ABC_tran
DUF99
Rep_fac_C
Sigma54_activ_2
nSTAND3
AAA_24
Motif
Other DBs
NCBI-GeneID:
138364441
NCBI-ProteinID:
XP_069180178
LinkDB
All DBs
Position
2:32973346..33004440
Genome browser
AA seq
355 aa
AA seq
DB search
MSLWVDKYRPKELSKLDYHLEQANHLRKLVECGDFPHLLIYGPSGAGKKTRIMCLLRELY
GPGVERLRIEHQNFESPSKKKLEIVTIASNYHLEVNPSDVGFYDRVVIQELIKTVASAQQ
LDTSGQREFKVVVLTEVDKLTKDAQHALRRTMEKYMTTCRLILCANSTSKVIPAIRSRCL
GVRVAAPSSETVAQVLQSTCKKEGLSLPLELAKKIAEKSNRNLRRALLMCEACKVQQYPF
SAQQEICVPDWETFLQGTAAKIVEEQSPNRLLEVRERIYELLTHCIPPEVIFKGLLKELV
RNCDGELKCEVTRLAAYHEHRLNLGSKAIYHIEAFIASFMAIYKKFLEESMSAMF
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgtgggttgacaagtaccggccgaaggagctgagtaaattagactaccacctg
gagcaagccaaccaccttaggaagctggttgaatgtggtgattttccccacctgctcatt
tatgggccttcgggagctggaaagaaaacgcgtattatgtgcctgcttcgggaactatat
ggacccggtgtggaaagacttagaattgaacatcaaaattttgaaagtccctccaaaaag
aagttggaaattgtaactattgccagcaactaccacttagaagtaaatcccagcgatgtt
ggcttctatgaccgagttgtgattcaggaactcattaaaactgtagcatctgcacagcag
ctggacaccagtggccaacgagaatttaaagtggtggtcttgacggaagttgataagctg
accaaagatgcccagcatgcccttcgtcgaacaatggagaaatatatgactacttgccgt
ttgattctctgtgccaattctacatccaaggtgattccagccatccgcagtcggtgctta
ggcgtgagagttgctgcgccatcctccgagactgtggcccaagtgcttcagagtacatgc
aaaaaggagggactttctcttcctctagaattagccaaaaaaattgctgaaaagtccaac
cgtaacctacgacgtgccctgctgatgtgcgaggcctgtaaagtgcaacaataccccttc
agtgcccagcaggagatatgtgtccctgattgggagacgttcttacaaggaactgctgcc
aaaattgttgaggaacagagccctaatcgattgctagaagtccgggaaagaatatacgag
ctcctgacacattgtatacctccagaggttattttcaagggtctgctgaaggagctggtg
cggaactgcgacggagagttgaaatgtgaagttactcgattagcggcataccacgagcac
cgcctcaacctgggctccaaggccatataccacatagaagcctttattgcttcctttatg
gcaatttataaaaagttcttggaggagagcatgtctgccatgttttag
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