Procambarus clarkii (red swamp crayfish): 138366487
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Entry
138366487 CDS
T07930
Name
(RefSeq) THO complex subunit 4-like
KO
K12881
THO complex subunit 4
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03013
Nucleocytoplasmic transport
pcla03015
mRNA surveillance pathway
pcla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138366487
09122 Translation
03013 Nucleocytoplasmic transport
138366487
03015 mRNA surveillance pathway
138366487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
138366487
03041 Spliceosome [BR:
pcla03041
]
138366487
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
138366487
TREX complex
138366487
Spliceosome [BR:
pcla03041
]
Complex C
Other components
EJC/TREX
138366487
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
138366487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
138366487
NCBI-ProteinID:
XP_069183644
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All DBs
Position
19:48183253..48184802
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AA seq
218 aa
AA seq
DB search
MAADIDMSLEDYIKTRMNMVGSRTCRDRSEDPQRMSVLSTVVVASQCKDMTDKELFAEFG
TIINAAVNNDNLGKSLGTAYIVFAREADALQALKQYNGFRFHGRPIGITMDGGSAGSGDI
KDRLDYNRVYRSGYRGKDRTGYRLGDRTNKRSAYKGRKFINYSNRDVERGGNGRGERDVS
SDERFGYIDSNHERWFGRRGTRNKVYNGNDPDIECDAW
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgatattgatatgagcctggaagactatattaagactcgaatgaatatggtt
ggttcaagaacatgtcgagaccgttcagaagatcctcagaggatgtctgttttgagcact
gtggttgtggcaagtcaatgcaaggatatgacagacaaagagctgtttgctgaatttgga
accattataaatgcagcagttaacaatgataacttgggaaagtcattaggtacagcgtat
attgtctttgcccgagaagcagatgcacttcaagctctcaagcagtacaatggttttcgt
tttcatggccgaccaataggaatcaccatggatggcggatcagctggtagtggcgacata
aaagatcggcttgactacaacagagtctacagaagtggctatcgtggaaaagaccgcact
ggctaccgtcttggcgatcgtactaacaaacggagtgcatacaaaggcagaaaattcatt
aattacagtaatagagatgtcgaacgtggtggaaatggtagaggcgagcgtgatgtaagt
agtgacgaacgctttggctacattgacagcaaccacgagagatggtttggtaggcggggt
accaggaataaggtatataatggcaatgatccggatattgagtgtgatgcctggtaa
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