Procambarus clarkii (red swamp crayfish): 138369020
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Entry
138369020 CDS
T07930
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138369020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
138369020
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
138369020
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
138369020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
138369020
NCBI-ProteinID:
XP_069187968
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All DBs
Position
26:11020559..11026762
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AA seq
203 aa
AA seq
DB search
MKSSNGHIVCVPGQRICEASEKLIAGEGTYTFNKYIYASLAGHVTVVPQEVVEPSCGYVN
QVVKVTLGRQGTVMPEAGSVVTCRVLSVNPNQATVSIICVGPNKLHSPVSGTVKKQNVRD
HQIDTVEMYNCFRPDDIILAVVLSLGDLRNYELSTAGTELGVVTSYCEEGHPLVPASWTT
MKCKCRTERRKVAKVMPPKNAST
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctagtaacgggcacattgtttgtgtgccaggacagagaatctgtgaggctagt
gaaaaactcattgccggtgaaggaacatatacttttaacaaatacatctatgcctctcta
gcagggcatgtcacagttgttccacaagaagttgtggagcctagttgtggttatgttaac
caagttgttaaggttaccttgggacgacaaggtacagtgatgccagaagctggtagtgtt
gtaacctgccgtgttttgagtgtaaacccaaaccaggctactgtatctatcatctgtgtc
ggtcctaacaagttgcattcccctgtttctggcactgttaagaaacaaaatgttagggac
catcaaattgacactgtggagatgtacaattgttttcgtccagatgacattattttggca
gttgttctctcacttggtgatctgcgtaactatgaactctctaccgcgggtacagagttg
ggggtagtaacgtcctattgtgaggagggtcatccactggtccctgcctcgtggaccaca
atgaagtgcaagtgtcgaacagaacgaagaaaagttgctaaagtgatgcctcctaaaaat
gcaagtacatga
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