Paraprevotella clara: PC1C4_01650
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Entry
PC1C4_01650 CDS
T08732
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pclr
Paraprevotella clara
Pathway
pclr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pclr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PC1C4_01650 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pclr03019
]
PC1C4_01650 (groL)
03110 Chaperones and folding catalysts [BR:
pclr03110
]
PC1C4_01650 (groL)
03029 Mitochondrial biogenesis [BR:
pclr03029
]
PC1C4_01650 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pclr04147
]
PC1C4_01650 (groL)
Enzymes [BR:
pclr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PC1C4_01650 (groL)
Messenger RNA biogenesis [BR:
pclr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PC1C4_01650 (groL)
Chaperones and folding catalysts [BR:
pclr03110
]
Heat shock proteins
HSP60 / Chaperonin
PC1C4_01650 (groL)
Mitochondrial biogenesis [BR:
pclr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PC1C4_01650 (groL)
Exosome [BR:
pclr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PC1C4_01650 (groL)
Exosomal proteins of other body fluids (saliva and urine)
PC1C4_01650 (groL)
Exosomal proteins of breast cancer cells
PC1C4_01650 (groL)
Exosomal proteins of colorectal cancer cells
PC1C4_01650 (groL)
Exosomal proteins of bladder cancer cells
PC1C4_01650 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BDI73443
LinkDB
All DBs
Position
complement(215847..217484)
Genome browser
AA seq
545 aa
AA seq
DB search
MAKDIKFNIEARELMKNGVDQLANAVKVTLGPKGRNVIIEKKFGAPHITKDGVTVAKEIE
LADAFENAGAQLVKSVASKTGDDAGDGTTTATVLAQSIVSVGLKNVAAGANPMDLKRGID
KAVAKVVEHIKGQAEQVGDDYNKIEQVATVSANNDPEIGKLLAEAMKKVSKDGVITIEEA
KGRDTTIGVVEGMQFDRGYLSAYFVTDTEKMECVMENPYILIYDKKISNLKDFLPILEPA
VQSGRPLLVIAEDVDSEALTTLVVNRLRSQLKICAVKAPGFGDRRKAMLEDIAVLTGGVV
ISEEKGLKLEQATIEMLGTCDKVTISKDNTTIVNGHGQSELIKDRVNQIKNEIANSTSDY
DKEKLQERLAKLSGGVAVLYVGAPSEVEMKEKKDRVDDALCATRAAIEEGIIPGGGVAYI
RAIKALEGLEGANADETTGINIVKRAIEEPLRQIVENAGLEGSVVVEKVRQAEGDFGYNA
REDKYENMKASGIIDPAKVTRVALENAASIAGMFLTTECVICDKKEEKADMPMGAPGMGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatattaaattcaacatagaagcccgtgaactgatgaagaacggcgtggac
cagttggccaatgcggtaaaggttactctcggcccgaaaggacgtaacgtcattatcgaa
aagaaattcggtgcgccgcatattacgaaagacggtgtgaccgtagccaaggaaatcgag
ttggccgatgcgtttgaaaacgcaggtgcgcagttggtcaagagcgtggccagcaaaacg
ggtgacgatgccggtgacggaacgactacggctaccgtattggcgcaaagcattgtgagc
gtgggcttgaagaacgtggctgccggtgcgaacccgatggacttgaaacgcggtatcgac
aaggccgtggccaaagtcgtagagcacatcaaaggccaggctgaacaggtgggcgatgat
tacaacaagatagaacaagtggctaccgtcagtgccaataatgacccggaaatcgggaaa
cttttggccgaagccatgaagaaagtcagcaaggacggtgtgattaccatcgaagaagcc
aagggacgcgacactactatcggtgtggtggaaggcatgcagttcgaccgtggctacttg
tcggcttatttcgtgaccgatacggagaagatggagtgcgtgatggagaatccttacatc
ttgatttacgacaagaagatttccaacttgaaggatttcctgcctatcctcgaaccggca
gtgcagagcggtcgcccgttgttggtgattgccgaagacgtagacagcgaggcgttgact
actttggtggtgaaccgtctgcgtagccagttgaagatttgtgccgtgaaagctccgggc
ttcggcgaccgtcgcaaggccatgttggaagatattgccgtgctgacgggcggtgtggtc
atcagcgaagagaagggcttgaagttggagcaggctaccatcgaaatgttgggtacttgc
gacaaggtgactatctctaaggataacacgaccatcgttaacggtcacggacagagcgag
ctcatcaaggatcgtgtcaatcagattaagaatgagattgccaactctaccagcgactac
gacaaagagaagttgcaggagcgtctggctaagttgagcggtggtgtggctgtgctctat
gtcggtgcgccgagtgaggtggaaatgaaagagaagaaagaccgtgtggacgacgccttg
tgcgcaacgcgtgcagctattgaggaaggtatcattccgggtggcggtgtggcatatatc
cgcgccatcaaggctttggaaggcttggaaggtgccaatgcagatgaaaccacaggtatc
aatatcgtaaaacgtgccatcgaagagcctcttcgtcagattgtggagaatgcaggtttg
gaaggttcggtggttgtagagaaagtacgccaggctgaaggcgacttcggttacaatgcc
cgtgaggacaaatacgagaacatgaaagccagcggtatcatcgacccggccaaggtgact
cgtgtggctttggagaatgccgcttctattgccggcatgttcttgactaccgaatgtgtc
atctgcgacaagaaggaagaaaaagccgatatgccgatgggtgctcccggaatggggggc
atgggcggcatgatgtaa
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