Paraprevotella clara: PC1C4_02230
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Entry
PC1C4_02230 CDS
T08732
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pclr
Paraprevotella clara
Pathway
pclr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pclr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PC1C4_02230 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pclr03021
]
PC1C4_02230 (rpoA)
03400 DNA repair and recombination proteins [BR:
pclr03400
]
PC1C4_02230 (rpoA)
Enzymes [BR:
pclr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PC1C4_02230 (rpoA)
Transcription machinery [BR:
pclr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PC1C4_02230 (rpoA)
DNA repair and recombination proteins [BR:
pclr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PC1C4_02230 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
NPL
SAM_EPH
DUF5998
Motif
Other DBs
NCBI-ProteinID:
BDI73501
LinkDB
All DBs
Position
complement(313530..314522)
Genome browser
AA seq
330 aa
AA seq
DB search
MAILAFQKPDKVLMLEADDKYGKFEFRPLEPGFGITVGNALRRILLSSLEGYAINTMRIA
GVEHEFASVPGVKEDVTNIILNLKQVRFKKIVEEFENEKVSITVENTTEFKAGDINKYLT
GFEVLNPELVICHLDAKATMQIELSINKGRGYVPSDENRIFCTDVNVIPIDSIYTPIRNV
KYAVENYRVEQKTDYEKLVLEISTDGSIHPKDALKEAAKILIYHFMLFSDEKITLENSDG
EGNEEFDEEVLHMRQLLKTKLVDMDLSVRALNCLKAADVETLGDLVQFNKTDLLKFRNFG
KKSLTELDDLLESLNLSFGTDISKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcgatattagcatttcaaaaacctgataaagtattaatgttggaggcggatgacaaa
tacggcaagttcgaatttcgtccgttggaacccggtttcggtattactgttggtaatgct
ttgcgccgtattcttctttcatcccttgagggatatgctatcaataccatgcgtattgcg
ggggtagagcacgagtttgcttcagttcccggagtaaaagaagatgttaccaacattatc
ttgaacctcaagcaagtacggttcaagaagatagtagaagaattcgagaatgagaaagtg
agtatcacggtagagaatacgactgaattcaaggccggagatattaacaagtatctgact
ggatttgaagtgttaaaccctgaattagttatttgccatttagatgccaaagcaacgatg
cagattgagttgtccattaacaaaggtcgggggtacgttccatctgatgagaaccgtatc
ttctgtactgatgtgaatgtgattccaatcgattcaatttacactccgattagaaatgtt
aagtacgctgttgaaaactatcgtgtagagcagaagactgactacgagaaactcgttctt
gaaatttctactgatggttccattcacccgaaggacgccctgaaagaggctgcaaaaatc
ctgatttatcacttcatgttgttctctgacgagaagattacattggagaattccgatggt
gagggcaatgaagagttcgatgaagaggtgctgcacatgcgtcaacttctgaagaccaag
ttggtagacatggatctttctgtccgtgccttgaactgtctgaaagccgcagatgtggaa
acgttgggcgacttggtacagtttaacaagaccgacttgttgaagttcagaaacttcggt
aagaaatcgctcactgagcttgatgatttgctagagagtctgaatctgtcgtttggaact
gatatttctaagtataaattagataaagattaa
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