Paraprevotella clara: PC1C4_05030
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Entry
PC1C4_05030 CDS
T08732
Name
(GenBank) ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pclr
Paraprevotella clara
Pathway
pclr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pclr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PC1C4_05030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pclr02000
]
PC1C4_05030
Enzymes [BR:
pclr01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
PC1C4_05030
Transporters [BR:
pclr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PC1C4_05030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_16
DEAD
RsgA_GTPase
Zeta_toxin
AAA
AAA_22
DUF815
nSTAND1
AAA_24
AAA_25
APS_kinase
nSTAND3
NACHT
Motif
Other DBs
NCBI-ProteinID:
BDI73781
LinkDB
All DBs
Position
complement(706193..708028)
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AA seq
611 aa
AA seq
DB search
MIKEFFSLLKRYMKPYRKYLTWAVILNFLSQWLNVFSFAALVPILNILFKIDTTKYEYMP
MDIHHLNKDVLINNGYYFINYIIEQNGAFVTLIFMGLILIVMTLLKTTGYFASAAVMVPL
RTGIVRDIRIEVYNKVLRLPLSFFSEERKGDIIARMSADVSVVENSLTSSLDMLIRNPIA
LVVCFITLFTVSWQLTLFVLVILPLAGWVMGSVSRKLKSQSVVAQGQWGDIMSQLDETLG
GLRIIKAFIAERKMSERFAKINNGFRDAMNAMVIRQSSAHPMSEFLGTCVIVIVLWFGGA
LILNQYSPIDAAMFIFYLVILYSIINPLKEFSKAFYNIPLGLASMERIDMILKAENHIKE
PERPLPLTDFEHELEFRDVSFSYIEGRQVLKHVNLKVQKGKTVALVGQSGSGKSTLVDLV
PRYHDVGEGALLIDGKNVKDVSIPALRSLIGNVNQEAILFNDTFYNNITFGVENATMEQV
IEAAKIANAHDFIMESEKGYDTMIGDRGGRLSGGQRQRVSIARAILKNPPILILDEATSA
LDTESERLVQEALERLMKSRTTIAIAHRLSTIKNADEICVLYEGEIVERGTHEELIALNG
YYKKLNDMQSL
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagaatttttctccttgctcaagcggtatatgaaaccttatcgtaaatatctg
acttgggctgtcatattgaattttttatcgcaatggcttaacgttttttcgtttgcagcc
ttggtgccgattttgaatatcttgtttaagatcgatacgacaaagtatgaatatatgccg
atggatatccatcatctgaataaggatgtcttaatcaataacgggtattatttcattaat
tatattattgaacagaatggggctttcgttacgttgatattcatggggcttattctgatt
gtgatgacattactgaaaactaccgggtattttgcttccgcggctgtgatggtgcctctt
cgtacaggaattgtacgtgatatccgtattgaagtgtataataaggtgttgaggttaccg
ttgagctttttctcggaggaacgcaagggggatatcatcgccagaatgagtgcggatgtg
tctgtggtggagaattcgctgacgagttcgcttgatatgttgattcgcaacccgatagct
ttggtcgtttgttttattacgctgtttaccgtaagttggcaactgacattgttcgtgctt
gtcattcttcctttggccggttgggttatgggatcggtaagccgtaaattgaaaagtcag
tcggtggtggctcagggacaatggggagacatcatgtctcagttggatgaaaccttgggg
ggccttcggattatcaaggccttcattgcagagcgtaagatgtcggaacggtttgctaaa
atcaacaatggattccgggatgccatgaatgcgatggttatccgtcagagttctgctcat
ccgatgagcgagtttttgggtacttgcgtgattgtgatcgtattatggtttggcggcgca
ttgattttgaatcagtattccccgatagatgccgctatgtttattttctatctggtgatt
ctttacagcatcatcaatcctctgaaagaattctccaaggctttttataatattcctttg
ggtttggctagcatggagcgtattgatatgatcttgaaggcggagaaccatatcaaggag
ccggaaaggcccttgcctttgacagactttgagcatgagctggagttccgtgacgtttcc
tttagttatattgaaggccggcaggtcttgaagcatgtaaacctgaaggtgcagaaagga
aagacggtggccttggtgggacagtccggttccggaaagtctactttagttgatttagtg
cctcgttatcatgatgtgggtgaaggagccttgcttatagacgggaagaacgtgaaggat
gtatctattccggctttgcgttctctgatcggtaatgtgaaccaagaagccattctgttc
aacgatacgttctataataatattacgttcggcgtggagaatgcgacgatggaacaggtt
atcgaggctgccaaaatagccaacgcgcacgatttcatcatggaatccgagaaagggtat
gatacgatgatcggcgaccgtggaggccgtttgtcgggcgggcagcggcagcgtgtcagc
atagcccgtgccatcctgaagaatccgccgatattgatactggatgaggcgacttccgca
ttggatacggagtcggagcggttggtacaagaggcgttggaacgcttgatgaaatcgcgt
acgaccattgcgattgcgcaccggcttagtacgattaagaatgcggatgaaatatgtgtg
ctttacgaaggagagattgtagagcgcgggacgcatgaagaactcatagccttgaacggc
tattacaagaaactaaacgatatgcaaagtctctga
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