Paraprevotella clara: PC1C4_07240
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Entry
PC1C4_07240 CDS
T08732
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pclr
Paraprevotella clara
Pathway
pclr03030
DNA replication
pclr03410
Base excision repair
pclr03420
Nucleotide excision repair
pclr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pclr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PC1C4_07240
03410 Base excision repair
PC1C4_07240
03420 Nucleotide excision repair
PC1C4_07240
03440 Homologous recombination
PC1C4_07240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pclr03032
]
PC1C4_07240
03400 DNA repair and recombination proteins [BR:
pclr03400
]
PC1C4_07240
Enzymes [BR:
pclr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PC1C4_07240
DNA replication proteins [BR:
pclr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PC1C4_07240
DNA repair and recombination proteins [BR:
pclr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PC1C4_07240
NER (nucleotide excision repair)
GGR (global genome repair) factors
PC1C4_07240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
DNA_pol_lambd_f
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BDI74002
LinkDB
All DBs
Position
complement(993745..996516)
Genome browser
AA seq
923 aa
AA seq
DB search
MDRLFLLDAYALIYRAYYAFIKSPRINSKGLNTSAILGFVNTLEEVLNKEHPSHIGVAFD
PAGPTFRHEAYPEYKAQREETPEAIRTAVPIIKDIIRAYRIPILEVAGFEADDVIGTLAT
QAAAHGNLETYMMTPDKDYGQLVNERVKMYRPKFGDKDFEIMGVKEVTGKFDISSPMQVI
DILGLMGDSSDNIPGCPGVGGKTASKLVNQFGSIENLLEHTDELKGSLKTKVETHRDTIA
FSKFLATIKTDVPITLDLEALTTKEPDAEALQRLFEDLEFRTLLERKFSKKQPTAEPGFF
QGSLFAEFADESPEASKYSNLNKYKKEDFDYQLIEKKEDRQRIIDLFVTKDFLSLDTETT
GTDPISAKLVGLSFSVEENQAFYVPIPQDPEEAQKIVNEFKSVYEDERILKIGQNIKYDL
MVLQNYGITLKGEIFDTMIAHYLLQPELRHGMDYLAEVYLNYQTIHIEELIGPKGKNQKN
MADLPPSQVYEYACEDADITLKLKNVFEPKLKEEGCYDLFREVEMPLMPVLAWMERNGVC
IDTEALKETSTLYTKEMNRLEEEIHALAGEPFNIASPKQVGEVLFEKLKISEKPKKTKTG
QYVTSEEVLETLRTRHPIVEKILEHRGLKKLLGTYIDALPKLINPETGHIHTSFNQTITT
TGRLSSSNPNLQNIPVRNEEGKEIRKAFIPEPGCEFFSADYSQIELRIMAHLSGDPHMIE
AFREGHDIHAATAAKIYKKPLEEVTREERSKAKTANFGIIYGITVFGLAERMNVSRAEAK
ELIDGYFTTYPKVKEYMQKSIETAREKGYTETIYHRKCYLRDINSHNAVVRGYAERNAIN
APIQGSAADIIKIAMIAIYHRFQKEHIRSKMILQVHDELNFSVYPEEKERVQQIVIEEME
RAYTMQVPLEADYGWGRNWLEAH
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggacagactttttttactcgatgcctacgcgctcatttacagagcttactacgcattc
atcaaaagcccccgcatcaattcgaaagggcttaatacatcagccatcttgggctttgtc
aacacattggaggaggtgctcaacaaagagcatccttcgcatatcggtgtggcttttgac
cctgcaggtcccactttccgtcacgaagcctatcccgaatacaaagcgcaacgggaagaa
acaccggaagccatccgcaccgccgtacctattataaaagatattatacgggcttaccgt
atccccatcctcgaagtcgccggatttgaagctgacgacgtaatcggcactttggccaca
caggctgccgcacacgggaacttggaaacttacatgatgacacccgacaaagactacggc
caattagtcaacgagagggtcaagatgtaccgtcctaaattcggagacaaggattttgaa
atcatgggggtaaaagaggtcaccgggaaattcgacatctcttctccgatgcaggtcatt
gatattctcggactgatgggagactcgtccgacaatattccgggttgtcccggtgtgggc
ggaaaaaccgcatccaaactcgtcaaccaattcggcagtatcgaaaatctgttggaacat
acggacgaactgaaaggcagtttaaaaaccaaagtggaaacccaccgcgacacgattgct
ttttctaagttcctggccaccatcaaaacggacgtgcccattacgctcgacctggaggca
ctcaccacaaaagagccggacgcagaagccttgcaacgtttattcgaagatttagagttc
cggactttactggaacgaaagttttccaaaaagcaaccgaccgcagaaccgggctttttc
caaggctctctctttgcagaatttgcggacgaatccccggaagcaagcaaatattcaaat
ctcaacaagtacaaaaaggaggatttcgactaccaactcattgaaaagaaagaagataga
cagcggattattgacttattcgttacaaaagattttctcagtctagacacggagaccacc
ggaaccgaccccatcagtgccaaattggtgggattgagctttagtgtcgaggaaaatcag
gctttttacgtaccgattccgcaagaccctgaagaagcacaaaagatagttaatgaattt
aaatcggtctacgaagacgagcggatactcaaaatcgggcaaaacatcaaatatgatttg
atggtactgcaaaactacggtattacattgaaaggcgaaatcttcgacaccatgattgcc
cattaccttttacaaccggaattacgtcatggcatggactatctggccgaagtctatctg
aactaccagaccatccatatcgaagaacttatcggaccgaaaggaaagaaccagaagaat
atggcagaccttcctccgtcgcaagtatatgaatacgcatgcgaagatgccgacattacc
ttgaaactgaaaaacgtgtttgaaccgaagttaaaggaggaagggtgttatgacctgttc
cgtgaagtagaaatgccgctcatgccggtattggcttggatggaacgcaacggagtgtgc
atcgacaccgaggcgttgaaggaaacttctacgctctacaccaaagaaatgaaccgtttg
gaagaagagatacacgccctggccggcgaaccgttcaacatagcctctcccaaacaagta
ggcgaagtcttgtttgaaaaactgaaaataagcgaaaagcccaagaaaaccaaaacagga
caatatgtcacctcggaagaagtattggaaacattacgcacgcgccatcccatcgtggaa
aaaatcctggaacaccgcggactgaaaaaactattgggtacatacatcgatgccttgccc
aagcttatcaatcccgaaaccggacatatccacacctccttcaatcaaaccattactacg
accggacgactgagcagcagtaacccgaacctgcaaaacatccctgtacgcaacgaggaa
ggcaaagaaatccgcaaggcttttatcccggaaccgggttgtgaattcttctcggccgac
tattcccaaatcgaactgcgtatcatggcccacttgagcggcgacccacacatgatagag
gctttccgcgaagggcacgacatccatgccgctaccgccgcaaaaatttacaaaaagcca
ttggaagaagttacccgcgaagaacgaagcaaggccaaaacagccaatttcggtatcata
tacggtatcaccgtattcggattggccgaacgaatgaacgtcagccgcgcggaagccaaa
gagttgattgacggctatttcaccacgtatcccaaagtgaaggaatacatgcagaagagc
attgaaacagcgcgtgaaaagggatataccgaaaccatttaccatcgtaaatgctatctg
cgcgacatcaacagccacaacgcagtggtgcgcggttatgccgaacgcaacgctatcaat
gccccgatacagggcagtgcggcggacatcatcaaaattgccatgatagccatttaccac
cgcttccaaaaagagcacatacgttctaaaatgattttacaagtacacgacgaattgaac
ttcagtgtctatccggaagaaaaagaacgcgtgcagcaaatcgtcatcgaagaaatggaa
cgcgcctacaccatgcaagtcccgcttgaagccgattacggttggggaaggaactggttg
gaagcacattga
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