Paraprevotella clara: PC1C4_09110
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Entry
PC1C4_09110 CDS
T08732
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pclr
Paraprevotella clara
Brite
KEGG Orthology (KO) [BR:
pclr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pclr03032
]
PC1C4_09110 (topA)
03400 DNA repair and recombination proteins [BR:
pclr03400
]
PC1C4_09110 (topA)
Enzymes [BR:
pclr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PC1C4_09110 (topA)
DNA replication proteins [BR:
pclr03032
]
Prokaryotic type
DNA Topoisomerases
PC1C4_09110 (topA)
DNA repair and recombination proteins [BR:
pclr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PC1C4_09110 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
YgjP-like
Motif
Other DBs
NCBI-ProteinID:
BDI74189
LinkDB
All DBs
Position
complement(1246199..1248547)
Genome browser
AA seq
782 aa
AA seq
DB search
MQKNLVIVESPAKAKTIEKFLGADYKVLSSYGHIRDLKKKEFSIDTTNFAPQYEIPSEKT
KLVNELKAEAKNAGTVWLASDEDREGEAISWHLYEVLGLKPEQTKRIVFHEITKPAILQA
IEHPRDIDLNLVNAQQARRVLDRIVGFKLSPVLWKKVKPALSAGRVQSVAVRLIVERERE
IQQFKSEESYRVVALFTPANSKDGTEIKAELNQRFKNKEEATRFLESCKDAAFTIRDIAT
RPQKRMPAAPFTTSTLQQEAAHKLGFTVAQTMMIAQRLYESGRITYMRTDSVNLSSLCIN
ASTAVIKELMGERYVKSRQFHTKTKGAQEAHEAIRPTYMDQTEIEGTPQERRLYDLIWKR
TVASQMADAEIEKTTASIQISGQDAAFVATGEVIKFDGFLKVYRESFDEDSENETAEGNL
LPPMETGQQLERKEIQALQRFTQHPPRYNEASLVKKLEELGIGRPSTYAPTISTIQQREY
VTKGDKGGEEKELVILTLKGDTISQQAKQTVIGAERGKLVPTDVGTVVNDFLLQYFPEIM
DYNFTAEVEKKFDDIAEGKTEWTQMMKDFYGDFEPEVEKTLNAKSEHKVGERLLGTDPQS
GKPVFVKIGRFGPVVQIGTAEDEEKPRFAQMKNGQSLETITLEEALELFKLPRDLGTFEN
TTVSIGTGRFGPYVLHNKKYVSLPKGSDPMSVTLQEAIKLIIEKRQAEVERHLRKFEEEP
ELEVLNGRYGPYIAYKGNNYRLPKTLAERAKELTLEECMTVVKEQDEKPKTTARKRTYSK
KK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaaatttggtgatcgtggagtctcctgccaaagccaaaaccatcgaaaagttt
ttgggagcagactacaaagtattatccagttacgggcatatccgtgacttaaagaaaaaa
gagttcagcatcgacacgacgaacttcgcaccgcaatatgagataccttccgaaaagacc
aaactggtgaacgaactgaaagcggaagccaaaaatgccggaaccgtctggctggcttcc
gatgaggaccgtgaaggagaggctatctcatggcatttgtatgaagtgctcggcctgaaa
ccggaacaaaccaaacgcatcgtgttccacgaaatcaccaaacctgccatcctgcaagcc
atcgaacacccgagggacatcgacctcaatctggtaaacgcccaacaggcacggcgggta
ctcgaccgtatcgtgggtttcaaactctctccggtgctttggaagaaagtaaaacccgcg
ctttctgccggacgcgtgcaaagcgtggccgtacgcctgattgtggaacgcgaacgggaa
atccaacagttcaaaagcgaagaaagttatcgcgtagtagcccttttcacgcctgccaat
agcaaggatggcacggaaatcaaggccgaactgaaccaacgtttcaaaaacaaggaggaa
gccactcgtttcctggaaagctgcaaagacgcggcctttaccatccgcgacatcgccaca
cgaccgcaaaaacgcatgccggcggctccgttcaccacttccacgctgcaacaggaagcg
gcccacaaactcggtttcaccgtggcgcaaaccatgatgatagcccaacgcctttatgaa
tccgggcgcatcacctacatgcgtacggactctgtcaatttgtcttcgctgtgtatcaat
gccagcacggctgtcatcaaggaactcatgggcgaacgttacgtcaagagccgccaattc
cataccaaaacgaaaggagcgcaggaagcccacgaggccatccgccccacctatatggac
cagacggaaatagagggcacgccgcaggaacgccgtctgtacgacttgatatggaaacgt
acggtcgcttcccaaatggccgatgctgaaatagaaaaaactaccgcttccatccagata
agcggacaagacgccgctttcgtcgccacaggagaagtcatcaaattcgacggtttcctg
aaggtatatcgggaaagtttcgacgaagactcggagaacgagacggcggaaggcaacctg
ctccccccgatggagaccggacagcaactggaacgaaaagagatacaagccctgcaacgg
ttcacccaacaccctccacgctacaacgaagccagcctggttaaaaaactggaagaattg
ggcatcgggcgcccttctacttacgctcctaccatcagcaccatacaacaacgcgaatac
gtgaccaaaggagacaagggaggagaagaaaaggaactggttatccttacgttgaaagga
gacaccatcagccaacaagccaaacaaaccgtcatcggagccgaaaggggcaagttggtt
ccgacagatgtggggacggtggtcaacgacttccttttacaatatttccccgaaatcatg
gattataacttcacggccgaggtggaaaagaagttcgacgacatcgcagaaggaaaaacg
gaatggacgcaaatgatgaaagacttctacggcgacttcgaaccggaggtggaaaaaacc
ctcaatgccaaatccgagcataaagtgggcgaacgtttgttgggcacggacccgcaaagc
ggaaaacctgtatttgtcaaaatcgggcgtttcggcccggtggtgcaaatcggaacggca
gaggatgaggagaaaccgaggttcgcccagatgaagaacgggcaaagcctggaaaccatc
actctggaagaagccctcgaactgttcaaacttcctcgcgacctcggcacttttgaaaac
acgaccgtatccatcggtaccggacgtttcggcccttacgtcttgcacaacaagaaatat
gtctcgctccccaaaggcagcgacccgatgagcgtcaccctccaagaggccatcaaactc
atcatcgaaaagcgacaggccgaagtggaacgccacttgagaaaattcgaagaagagccg
gaattggaagtactcaacggacgctacggtccttacatcgcctacaaaggcaataattac
cggttgcctaagactctggcagaacgtgccaaagaactaacactggaggagtgcatgacc
gtggtcaaggaacaagacgagaaacctaaaacaacggcacgtaaaagaacttatagcaag
aaaaaatga
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