Paraprevotella clara: PC1C4_11930
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Entry
PC1C4_11930 CDS
T08732
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
pclr
Paraprevotella clara
Pathway
pclr00860
Porphyrin metabolism
pclr01100
Metabolic pathways
pclr01240
Biosynthesis of cofactors
Module
pclr_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
pclr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PC1C4_11930 (cobD)
Enzymes [BR:
pclr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
PC1C4_11930 (cobD)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
CobD_Cbib
Motif
Other DBs
NCBI-ProteinID:
BDI74471
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Position
complement(1659378..1660349)
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AA seq
323 aa
AA seq
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MHSIIPLLIGWGLDLCAGDPARLPHPIVAFGRWISFFERKANHGDHRRAKGTFWIVATLC
TLFLSAHLALAALWTACLQWEAGGAYLYYLVTGILIFYCLAGTTLIREVRRVFCAADRSL
EEGRRQVSRIVGRDTSRLSDQEIRTAALETLAENLSDGVIAPLFWLYLLGIPGMLTYKMI
NTMDSMLGYRTERFKDFGRAAARIDDAANYLPARLTALLMALAACIPFRKGKSARNLKEE
LRFIRRYGRMHASPNSGYPEAALAGILDCRFGGPHHYFGEYCFKPYIGNRLRPLTTTDMQ
QAVAVNRRAEILMVLTGILLYLL
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcattattcctttacttatcggatgggggttggacctctgcgccggagacccc
gcccggctgccgcaccccatagtggctttcggccgctggatcagtttttttgaacggaaa
gccaaccacggagaccaccggcgtgccaaagggactttctggatcgtcgccacgctctgc
accctcttcctatccgcccatctcgccttggccgccttatggacggcctgcctgcaatgg
gaggccgggggagcttacttgtattatctcgtgacgggcatacttatcttttactgtctg
gctggcacgacgctcattcgggaagtgcgcagggtgttctgcgccgccgaccgttctttg
gaagaaggaaggcggcaagtgagccgtatcgtgggacgggatacaagccgcctcagcgac
caggaaatacgcaccgccgctctggaaactttggcggaaaacctgagtgacggtgtcatc
gccccgttattctggctctatctgctcggcatcccaggaatgctgacttataaaatgatt
aacaccatggattccatgctcggctaccgcaccgaacggttcaaggacttcggccgcgca
gccgcccggatagacgatgccgccaactacctgcccgcccgtctcaccgccctgttgatg
gcgttggccgcgtgcattcccttccggaaaggcaaaagtgcccgcaacctgaaagaagaa
ctgcgcttcatccgccgctacggacggatgcacgccagcccgaactccggctaccccgag
gcggcattggccggcatactggattgccgcttcggcgggccgcaccactacttcggcgag
tattgtttcaaaccgtacatcggaaaccgcctgcgcccgctcaccacgaccgacatgcaa
caggccgtggctgtcaaccggcgtgcggaaatcctgatggtcctgacgggcatcttactc
tacctcctctga
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