Paraprevotella clara: PC1C4_18080
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Entry
PC1C4_18080 CDS
T08732
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
pclr
Paraprevotella clara
Pathway
pclr00541
Biosynthesis of various nucleotide sugars
pclr01100
Metabolic pathways
pclr01250
Biosynthesis of nucleotide sugars
Module
pclr_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pclr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PC1C4_18080 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pclr01005
]
PC1C4_18080 (kdsA)
Enzymes [BR:
pclr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
PC1C4_18080 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
pclr01005
]
Lipid A
PC1C4_18080 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
BDI75086
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Position
2538398..2539150
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AA seq
250 aa
AA seq
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MTPIFIAGPCVIESADLLDEVACELVRIKQKFNIEIYFKASFDKANRTSVHSYRGPGLEK
GLQMLGDVREKYGLKLLTDIHESFQAAPVGEVVDVLQIPAFLCRQTDLLVAAAHTGKIVN
IKKAQFLSGLDMKYPVEKVQESGAKEIWLTERGNIYGYNNLVVDFRNIPDMKTFVPRVVM
DCTHSVQRPGAAGGKTGGNREFVPAMALAAKAFGANGYFFETHPDPEKAMSDGPNMLYLK
DLETVIASLL
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgacccctatatttatagccggtccgtgtgtgattgaatccgctgatttgttggacgag
gtggcgtgcgagctggttcggataaagcagaaatttaatatagagatttactttaaggct
tcttttgataaagccaaccgtacttcggtgcattcttatcggggccccggattggagaag
ggtttgcagatgttgggtgacgtgcgtgagaagtacggtcttaaacttctgacggacatt
catgaaagttttcaggccgctccggtgggcgaagtggtggatgtcttacagataccggcc
tttttgtgtcgtcagaccgatttgttggtggcggcagcccataccggtaagattgtcaac
atcaagaaagcccaattcctgtcgggacttgacatgaaataccccgtggaaaaagtgcag
gagagcggagcaaaggaaatttggctgaccgagcgtggtaatatttacggttacaataac
ttggtggtggatttccgtaatattccggatatgaaaacctttgtgccccgtgtggtcatg
gactgtacgcactccgtacaacgtcccggtgcggcaggcggaaagactggcggaaaccgt
gagttcgtgccggccatggccttggcggcgaaagcgttcggtgcgaacggatatttcttc
gagacgcatcccgatccggagaaagccatgagcgacggcccgaatatgttgtatctgaaa
gatttggaaaccgtaattgcatcattgctatga
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