Paraprevotella clara: PC1C4_20110
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Entry
PC1C4_20110 CDS
T08732
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pclr
Paraprevotella clara
Brite
KEGG Orthology (KO) [BR:
pclr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pclr03009
]
PC1C4_20110 (rimO)
Enzymes [BR:
pclr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PC1C4_20110 (rimO)
Ribosome biogenesis [BR:
pclr03009
]
Prokaryotic type
ribosomal protein modification factors
PC1C4_20110 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
Motif
Other DBs
NCBI-ProteinID:
BDI75289
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Position
2799725..2800957
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AA seq
410 aa
AA seq
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MRQLEANGYKVTHDTDRPQGEIAVINTCGFIGDAKEESINMILEFCQAKEEGRLKKLFVM
GCLSERYLKELGEEIPQVDKFYGKFDWNELLTDLGKAYYQELSLERELTTPSHYAYLKIS
EGCDRRCSYCAIPIITGKHVSRPIEDILDEVRMLVSRGVKEFQVIAQELTYYGLDLYHRQ
MLPELIERMADIPGVDWIRLHYAYPANFPVDLFRVMREKKNVCKYMDIALQHISDNMLQR
MHRHVTRQETYALIERFREEVPGIHLRTTLMVGHPGETEEDFNELLDFVRKVKFDRMGAF
AYSEEEGTYSAEHYEDEIPFETKQARLDKLMALQQKISADLAAQKIGKIFKVIIDRSEGE
YYIGRTEFDSPEVDPEVLIPVSEGTLSLGTFYEVKITDADDFDLYGTRMF
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagttggaagccaatgggtacaaagtgacgcatgatacagaccgtccccaaggg
gaaatcgctgtgattaatacttgcgggtttatcggagatgccaaagaggaaagcatcaat
atgatattggaattttgccaggctaaggaagaggggcgtttgaagaaactgtttgtcatg
ggttgcctctcggaacgctatctgaaagaattgggtgaagaaattccacaggtcgataag
ttttatggtaagttcgattggaatgaattgttgaccgatttaggaaaggcatattatcag
gagttgagtttggaacgtgagttgacgaccccttcccattatgcttatctgaaaatctcc
gaagggtgcgaccgtcggtgctcctattgtgccatacctattatcacggggaagcatgtg
tcgcgtccgatagaggatattttggatgaagtacgaatgttggtgtcacgcggggtgaag
gaatttcaggtcattgcccaggagttgacctactacggtctggacctttaccatcgtcag
atgctgccggaacttattgaacggatggctgacatacccggtgtggactggattaggctc
cattatgcttatcccgcgaattttccggtagatttattccgggtgatgcgtgagaaaaag
aatgtttgcaaatacatggacattgctttacagcatattagtgacaatatgttacagagg
atgcatcgccatgtgactcgccaggaaacttatgctctgatagaacgtttcagggaagaa
gtgccgggaattcatttgcgtacgactttgatggtagggcaccctggagagacggaagaa
gatttcaatgagttgttggattttgttcgtaaggttaaattcgaccgtatgggagctttt
gcttattcggaggaagaaggaacttattcggctgagcattatgaggatgagattcctttt
gagaccaagcaagccagattggataaattgatggctttgcagcagaagatttcagcggat
ttggcagctcagaaaataggaaagattttcaaggtgattatagaccgtagcgaaggagaa
tattatataggacgtacggagtttgattcgcctgaagtggatccggaagttctgattcct
gtgagcgaagggactttatctctcggaacgttctatgaggtgaagattacagatgccgat
gactttgatttgtatggtactcgaatgttttaa
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