Paraprevotella clara: PC1C4_20300
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Entry
PC1C4_20300 CDS
T08732
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
pclr
Paraprevotella clara
Brite
KEGG Orthology (KO) [BR:
pclr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pclr03032
]
PC1C4_20300
03036 Chromosome and associated proteins [BR:
pclr03036
]
PC1C4_20300
03400 DNA repair and recombination proteins [BR:
pclr03400
]
PC1C4_20300
DNA replication proteins [BR:
pclr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PC1C4_20300
Chromosome and associated proteins [BR:
pclr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PC1C4_20300
DNA repair and recombination proteins [BR:
pclr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PC1C4_20300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
PqqD
NusA_N
HTH_24
Motif
Other DBs
NCBI-ProteinID:
BDI75308
LinkDB
All DBs
Position
complement(2829845..2830123)
Genome browser
AA seq
92 aa
AA seq
DB search
MTKAEIVNEISKKTGIDKATVLTAVEAFMESVKESLIQKEDNVYLRGFGSFILKKRAKKT
ARNISKNTTIIIDEHNIPAFKPAKVFVDAIKK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagcagaaattgtaaacgagatttccaaaaaaacgggtatcgacaaggcaacc
gtgctgactgccgtagaggcatttatggaatcagtaaaggaatctttgattcaaaaagag
gataacgtatatcttcgcggcttcggtagtttcattcttaaaaaaagagctaaaaagacg
gctcgtaatatttccaagaatacgactataatcatagacgagcacaacattccggccttt
aagccggctaaggtctttgttgatgcaatcaagaagtaa
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