Paraprevotella clara: PC1C4_20400
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Entry
PC1C4_20400 CDS
T08732
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02481
two-component system, NtrC family, response regulator
Organism
pclr
Paraprevotella clara
Brite
KEGG Orthology (KO) [BR:
pclr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pclr02022
]
PC1C4_20400
Two-component system [BR:
pclr02022
]
NtrC family
Unclassified
PC1C4_20400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_2
AAA
AAA_5
AAA_7
Mg_chelatase
AAA_19
TIP49
RWP-RK
AAA_30
MCM
HTH_17
TsaE
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BDI75318
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Position
2839919..2841268
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AA seq
449 aa
AA seq
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MMNTILIIDDEPIIRKLLARMMELEGYEVFQAADRASGLKLLTAKTPQLVLCDVFLPDGN
GVEMVKEIKELQPETEVILLTAHGNIPDGVQAIKNGAFDYITKGDDNNKIIPIISRAMEK
INSRPVQPSGSTVVPVRESAFDTVLGHSRGLQQVIQLARKVAVTDVPVLLTGETGTGKEV
FAQAIHNGSARAKQPFVAINCSAFSKELLESEIFGHKAGAFTGALKDKKGLFEEANHGTI
FLDEIGEMAYGLQAKLLRVLETGEYIKVGDTKPTKIDVRIVSATNRNLKEEIANSNFRED
LYFRLSVFHLHLPPLRERREDIPELAAAFLKFFAAKMGKQVKGFAADCQAWMQSYAWPGN
VRELRNVIERALIICDDYITLDDMPLDFRSSTLSGSAADGDDFELAEAEHRHIQRVLQYT
KGNKAEAARLLKIGLTTLYRKIEEYGINI
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatacgatactgattatagatgacgaacccatcatacggaaattgctggcacgc
atgatggaactggaaggttatgaagtgtttcaggcggccgaccgtgcctcgggcctgaag
ctgctcacggccaaaacgccgcaactggtattgtgcgatgtgtttctgcccgatggcaac
ggggtggagatggtaaaggagataaaagaactgcaacccgaaacagaggtcatcctcctg
acggctcacggaaatatcccggacggggtacaggctatcaaaaacggcgcattcgactac
attaccaaaggggatgacaacaataagatcataccgataatcagccgtgccatggagaaa
atcaacagccggccggtgcagccttcgggaagcaccgtcgtgccggttcgtgaatcggcc
ttcgacaccgtcttgggacattcgcgaggtttgcagcaagtgatacagttggctcgtaaa
gtggccgtgacagacgtgccggtgctgcttacgggcgagacggggacgggaaaagaggta
ttcgcacaggccattcataacgggagcgcgcgtgccaagcagccgtttgtggccatcaac
tgttccgcttttagcaaagaattgttggaaagcgagatattcggccacaaggccggggct
ttcaccggggctttgaaggacaagaaaggactgtttgaagaggccaaccacggcacgata
tttctggacgagatcggggagatggcgtacggcttgcaggccaaactcttgcgcgtgctc
gaaacaggggaatatataaaggtgggggatacgaaacccacgaaaatagacgtgcgtatc
gtgtcggccaccaaccgcaacttgaaagaagagatagcgaacagcaatttccgggaagat
ttgtatttccgcttgtccgttttccatcttcatctgccgcccttgcgcgagcgcagggag
gatataccggaactggccgcagccttcctgaagttttttgccgccaaaatgggaaaacag
gtcaagggatttgcggcggactgtcaagcctggatgcagtcgtatgcctggccgggaaac
gtacgtgagttgcgtaacgtgatagagcgtgcgttgattatctgcgacgactacatcacg
ttggatgacatgcctcttgatttcaggtcgtccactttatccggctcggctgccgacggt
gacgattttgaactggcggaggcggagcatcgtcatatccaacgtgtattacagtacacg
aaagggaataaggccgaggcggcccggctcctgaaaataggattgaccaccctctatcgg
aagatagaagagtacggtattaatatctaa
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