Pedobacter cryoconitis: AY601_0356
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Entry
AY601_0356 CDS
T04341
Name
(GenBank) MiaB-like tRNA modifying enzyme
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
pcm
Pedobacter cryoconitis
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcm03016
]
AY601_0356
Enzymes [BR:
pcm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
AY601_0356
Transfer RNA biogenesis [BR:
pcm03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
AY601_0356
Prokaryotic type
Methylthiotransferases
AY601_0356
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
DUF4246_N
Motif
Other DBs
NCBI-ProteinID:
AMP97319
UniProt:
A0A127V7Y8
LinkDB
All DBs
Position
398669..399988
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AA seq
439 aa
AA seq
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MKKVAFYTLGCKLNFSETSTIGRLFTDAGYAVVDFTDAADVYVINTCSVTEHADKKCRKV
VKEALKYAPNAYITIVGCYAQLKPVEIAEIEGVDMVLGAAEKFRIVEYISDLTKLPKAVI
HQQNIEKVNHNFIAAYSIGDRTRTFLKVQDGCDYPCTYCTIPLARGGSRSDTIENVVNRA
RQIAESGVKEIVLTGVNLGDFGIRDGKREDKFFDLVKALDEVEGIERIRISSIEPNLLSN
EIISFVAASKRFVPHFHIPLQSGSDKILGLMKRRYRRDLYTERVATIKALIPDCCIGVDV
IVGFPGETKEDFLDTYQFLNELDISYLHVFTYSEREQTEAAEMTGAVAGSTRADRSKMLH
ILSDKKRRAFYQSQIGTVGEVLFEDDQKNGFMHGFTKNYVKVKAKYDPVMVNEIKMVKLM
ELTADGEVEVMETEQVLAH
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagtagcattttatacactgggttgcaagttaaacttttcggaaacttcaact
atcggacgtctttttactgatgcaggttatgctgttgtagattttactgacgccgccgat
gtatatgtaatcaatacctgctctgtaactgagcatgcggataaaaagtgccgtaaggta
gtgaaggaagctcttaaatatgcacccaatgcttatattactattgttggttgttatgcg
cagttgaagcctgttgaaattgctgaaattgaaggtgtggacatggtattgggcgcggcc
gagaaattccgtattgtagaatatatctcagacctgaccaaattaccaaaagccgttatt
catcagcaaaatattgaaaaagttaatcataattttatagctgcctattctattggggac
agaacacgtactttcctgaaagttcaggatggctgtgattatccttgtacttattgtaca
attccgcttgcaagaggtggcagcagaagtgatactatagaaaatgtagttaatcgtgcc
cggcaaattgcggaaagtggtgtaaaagaaatcgtactgactggtgtaaaccttggtgat
tttggtatccgtgacggaaagcgtgaggataagttttttgatttggtgaaagctttggac
gaggttgaagggattgaaagaatccggatctcttctattgaacctaatttattaagcaat
gaaattatcagctttgtagctgcttctaaaagatttgtgccccatttccatattccatta
caatcgggttctgataagatcctgggactaatgaaaagacgttaccgcagagatttatac
acggaacgtgtagcaacaattaaagcattaattcctgattgctgtatcggagtagacgtc
attgttggtttcccgggagaaactaaagaagacttcttagatacttaccagttcctgaat
gaacttgatatttcttacctgcatgtttttacgtattcggagcgtgaacagactgaagct
gctgaaatgactggtgctgttgccggaagtacacgtgctgaccgaagtaaaatgctgcat
attttatctgataaaaaacgcagggctttttaccagtcgcaaataggaactgttggagaa
gttttatttgaagacgatcagaaaaatggtttcatgcatggttttaccaagaattatgtg
aaggtgaaagctaaatatgaccctgtaatggttaatgaaattaaaatggttaaactaatg
gaattaactgctgatggtgaggtagaagttatggaaactgaacaagttttagcacattaa
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