Pedobacter cryoconitis: AY601_0631
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Entry
AY601_0631 CDS
T04341
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm03030
DNA replication
pcm03430
Mismatch repair
pcm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AY601_0631
03430 Mismatch repair
AY601_0631
03440 Homologous recombination
AY601_0631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcm03032
]
AY601_0631
03400 DNA repair and recombination proteins [BR:
pcm03400
]
AY601_0631
Enzymes [BR:
pcm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AY601_0631
DNA replication proteins [BR:
pcm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AY601_0631
DNA repair and recombination proteins [BR:
pcm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AY601_0631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
DEDDh_C
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
AMP97581
UniProt:
A0A127V8K2
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All DBs
Position
complement(735406..736797)
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AA seq
463 aa
AA seq
DB search
MLKYAVVDIETTGGFAAGNGITEISILIHDGSKVIDRFETLINPQQDIPIYIQTLTGISE
EMVSSAPLFEQVAPQIYELLKDKIFVAHNVNFDYSFVRHQLAHSGFVLQSKKLCTVRMSR
KIVPGLSSYSLGKLCASLGIPLNGRHRAGGDAAATALLLKLLLEKDEAGVIPLSLLKSSK
EQVLPPNLSRDSIDALPGQPGVYYFKDQKGKIIYVGKAINIKKRVYSHFSGNKTNQQRQD
FLKQIHEVDFTICGTELMALILEASEIQKHWPEKNRALKRFEQKYALYDFEDQKGYIRLG
IDKYKKNSHALYTFNSLLSGQSMLRGMINEHTLCEKLCFIQKNRLACTAHEKGNCHGACL
GIEDPANYNTRVNEAITHLKVALPSFALIDSGRNKDEKSCLWVEEGKFYGMGYISSHSDI
TDLENLKSCIVPYTSNDYILNMVLAYAESHPQQRIEISKSIHF
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaatacgcagtagtcgatattgaaactaccggtggttttgccgccggtaatggg
attacagaaatctctatcctgattcatgatggttcaaaagtcatagaccgctttgaaaca
ttaattaatcctcagcaggatataccaatctatatccaaactttaaccggcatcagtgag
gagatggttagcagtgctccgctgtttgaacaagtagctcctcaaatttatgagctttta
aaggataagatctttgtagcgcacaatgtgaactttgattactcttttgtaaggcatcag
cttgcacattcgggatttgtgttacaatcgaaaaagttatgtacggtaaggatgagcaga
aaaattgtccccggactttcttcttatagtttaggcaagctctgtgcatcactcggtatt
ccattaaatggccgtcaccgcgctggtggtgatgctgcagcaacggctttattgcttaag
cttttattggaaaaagatgaggcaggagttattccgctttccttattgaaaagctccaaa
gaacaagttttgccaccaaatttatcaagggatagtattgatgctttacccgggcaaccc
ggtgtctattattttaaagatcaaaaagggaagattatctacgttggtaaagctataaat
atcaagaaaagggtatattctcatttctccggaaataagactaatcagcaaaggcaggat
ttccttaaacaaattcatgaagttgatttcacgatttgcggcacggagttgatggcgctg
attctggaagcttcagaaatacagaaacactggccagaaaaaaacagagctttaaagcgc
tttgaacagaaatatgctttatatgattttgaagaccagaagggttatatccgtttaggt
attgataagtataagaaaaacagtcatgctttatatacttttaacagtttgctgtctgga
caaagtatgttacggggaatgatcaacgaacatacgctatgtgaaaagttatgttttatt
cagaagaacagactggcttgtactgcgcatgagaaaggaaattgtcatggtgcttgcctg
ggaatagaagatccggccaactataataccagagtgaatgaggctattacccatttaaaa
gttgcacttccctcctttgcgctgatagattcaggtagaaataaggatgaaaagagctgt
ttatgggtggaagagggtaaattttatgggatgggttatatttcttctcacagtgatatt
actgatttggaaaacctaaaatcttgtatagtcccttatacttcaaatgattatattttg
aatatggttcttgcttatgcagaatcccatcctcagcaaaggattgaaatctcaaaatct
atacacttctag
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