Pedobacter cryoconitis: AY601_0746
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Entry
AY601_0746 CDS
T04341
Name
(GenBank) Carbohydrate-binding protein SusD
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pcm
Pedobacter cryoconitis
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcm02000
]
AY601_0746
Transporters [BR:
pcm02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
AY601_0746
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
AMP97692
UniProt:
A0A127V8H7
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All DBs
Position
873166..874677
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AA seq
503 aa
AA seq
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MKNRYIIAFMALTISLSGCTKLDEKLNGQIGNGGINSGNVADLLNGSYKAMRSPFQGPFG
FWALQEFPSDEAIVPTRAGDWDDNGAWRALHLHRWEADHTRISSSFRDLNGVSYAATNVL
LYNPTPVQAAEARFLRAFAQFSILDGWGQVPYREPGDDVSLPSKVRKASEEIAYLIAELT
AIIPSLPDGANYLANKDAGKMLLMKCYLNKGAFLNRAVPTFDAADMAKVITLADEIINSG
KYQLATNYFDNFAPNNDVISKENVFTSQNIGGSDAGGVRDMWTMPLHYNQKPNGNNGFST
LSDFYKKFEASDQRIGGAYAGVTNISGVKVGFLIGQQVDEKGALIKDRRNNNLIFTPEVS
NVETDANHLEVAGIRVIKYPIDYTYGSTGKADNDWVYYRYSDVLLMKAEAQVRTGLAGPA
LTVVNGLRTVRGASALGSLTLDNLLDERGREFFWEGVRRQDLIRFGKFLTPWQEKQVDNP
RNLVFPIPDNQLSNPNYIQNAGY
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatagatatataattgcttttatggcgctgacaatatccttgtcgggctgtaca
aaattagatgagaaattaaacggacaaattggtaatggtggaattaatagcgggaacgtt
gccgatttgttaaatggaagttataaggctatgcgtagtccttttcaggggccatttggt
ttttgggcattgcaggaatttccttcagatgaagcgattgtacctacaagagctggtgac
tgggatgataatggtgcctggcgtgctttacacttacatcgctgggaggcagatcatacc
cgtatttccagtagtttcagagatttgaacggcgtgagttatgcggctacaaatgtattg
ttatataatccaacacctgtacaggcagcagaagcgagatttcttcgtgcatttgcacag
ttttctattctggatggctggggacaggttccttaccgtgagcctggagatgatgtgagt
ttaccttcgaaggttagaaaagcatcggaagaaattgcttacctgatcgcagaactgact
gcaattatcccttcgcttcctgatggggctaattatcttgcaaataaagatgcaggaaaa
atgttgttgatgaagtgttacctgaataaaggtgcatttttaaatcgtgcggtaccaact
tttgatgctgcagatatggcaaaagttatcacacttgctgatgaaattatcaattctggt
aagtatcagctggcaacaaactattttgataattttgcgcctaacaatgatgtgatttct
aaggaaaatgtattcacatcccaaaacattggtggttctgatgcgggtggagtgagagat
atgtggacgatgcctttgcattataatcaaaaaccaaatggtaataatggattttcaact
ttatctgatttctataagaaattcgaggcatccgatcaacgtattggtggtgcatacgct
ggagtaacaaatatttctggtgttaaagtgggctttttgatcggtcagcaagtggatgag
aaaggtgcattaattaaagacagacgtaataataacctgatctttacaccggaagtaagt
aatgtggaaactgacgctaaccacctggaagttgcaggtatccgtgttatcaaatatcct
attgattatacctatggttcaactggaaaagcagacaatgactgggtgtattacagatat
tctgatgtattgcttatgaaagctgaagcacaggtgagaacaggcttagctggaccggcc
ttgacggtggttaatggactaaggactgtcagaggagctagtgctttaggaagcttaaca
ttggataatttactggatgaacgtggacgtgagtttttctgggaaggggtaagaagacaa
gatttaatccgttttggtaaattcttaacgccatggcaagagaaacaagttgacaatccg
agaaatctggtattccctataccagataatcaattatcgaatccaaattatattcagaat
gctggatattaa
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