KEGG   Pedobacter cryoconitis: AY601_0855
Entry
AY601_0855        CDS       T04341                                 
Name
(GenBank) hypothetical protein
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pcm  Pedobacter cryoconitis
Pathway
pcm02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pcm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AY601_0855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcm03021]
    AY601_0855
Transcription machinery [BR:pcm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AY601_0855
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 DUF722 GerE Sigma70_r2 HTH_23 HTH_5 HTH_28 URGCP_N HTH_Tnp_ISL3 UPF0122 HTH_17 TFIIB
Other DBs
NCBI-ProteinID: AMP97796
UniProt: A0A127V8Z7
LinkDB
Position
990523..991101
AA seq 192 aa
MRTTQLVYHSYSDVELTAYLKEGDRAAFEEIYERYWKKLYNETFKRLRNMELVEEVVQDV
FSNLWMKKEKKNIDNIYPYLLGAIRYQVYILYKKGKTPPHFEAPLDHLLLSTLQADSLFK
AKELKWCISIWLTMQPVKRAEIFRMKYLDDRSTKEISEILHISQKTVQNQLLHAFSDLRA
FLNRIMVFLYLL
NT seq 579 nt   +upstreamnt  +downstreamnt
atgagaactacgcaattggtttatcattcttactctgatgtggaattaactgcttacttg
aaagaaggggacagggctgcatttgaagagatttacgaaaggtattggaaaaaactctac
aacgaaacttttaaacggttacgaaatatggaactggtggaagaagttgttcaggatgtc
tttagtaatctctggatgaaaaaagaaaagaaaaacattgataacatctatccatatctt
ttaggggctatccgctatcaagtatatatactttataaaaagggtaaaacaccaccacat
tttgaagccccgcttgatcatctgcttttatctacactacaggctgattctttatttaaa
gcgaaagaacttaaatggtgtatttctatctggctgacaatgcaacccgtaaaacgggcg
gaaattttcagaatgaaatatctggatgaccgctctacaaaagagattagtgaaatactt
catatttcccaaaaaacggtgcagaatcaattacttcatgctttttcagacttacgggct
tttttaaatagaattatggtgtttttatatttattatag

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