Pedobacter cryoconitis: AY601_0855
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Entry
AY601_0855 CDS
T04341
Name
(GenBank) hypothetical protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AY601_0855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcm03021
]
AY601_0855
Transcription machinery [BR:
pcm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AY601_0855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
DUF722
GerE
Sigma70_r2
HTH_23
HTH_5
HTH_28
URGCP_N
HTH_Tnp_ISL3
UPF0122
HTH_17
TFIIB
Motif
Other DBs
NCBI-ProteinID:
AMP97796
UniProt:
A0A127V8Z7
LinkDB
All DBs
Position
990523..991101
Genome browser
AA seq
192 aa
AA seq
DB search
MRTTQLVYHSYSDVELTAYLKEGDRAAFEEIYERYWKKLYNETFKRLRNMELVEEVVQDV
FSNLWMKKEKKNIDNIYPYLLGAIRYQVYILYKKGKTPPHFEAPLDHLLLSTLQADSLFK
AKELKWCISIWLTMQPVKRAEIFRMKYLDDRSTKEISEILHISQKTVQNQLLHAFSDLRA
FLNRIMVFLYLL
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgagaactacgcaattggtttatcattcttactctgatgtggaattaactgcttacttg
aaagaaggggacagggctgcatttgaagagatttacgaaaggtattggaaaaaactctac
aacgaaacttttaaacggttacgaaatatggaactggtggaagaagttgttcaggatgtc
tttagtaatctctggatgaaaaaagaaaagaaaaacattgataacatctatccatatctt
ttaggggctatccgctatcaagtatatatactttataaaaagggtaaaacaccaccacat
tttgaagccccgcttgatcatctgcttttatctacactacaggctgattctttatttaaa
gcgaaagaacttaaatggtgtatttctatctggctgacaatgcaacccgtaaaacgggcg
gaaattttcagaatgaaatatctggatgaccgctctacaaaagagattagtgaaatactt
catatttcccaaaaaacggtgcagaatcaattacttcatgctttttcagacttacgggct
tttttaaatagaattatggtgtttttatatttattatag
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