Pedobacter cryoconitis: AY601_0857
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Entry
AY601_0857 CDS
T04341
Name
(GenBank) Anti-FecI sigma factor, FecR
KO
K07165
transmembrane sensor
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AY601_0857
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Gene cluster
GFIT
Motif
Pfam:
FecR
FecR_C
BapA_N
DUF4988
FLgD_tudor
Motif
Other DBs
NCBI-ProteinID:
AMP97798
UniProt:
A0A127V9X0
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Position
992612..993799
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AA seq
395 aa
AA seq
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MNSKKIKDEFIKAVKAYLEGTADETQLLFVEQYFDLFLDTEDVFESMDNDEIQDIHDRML
WKINYEIEKKNRIFPGNMETVRSFSKYLYIAAAAAFVIPMSLYIYQRNQVKPVSTQLVTK
ITPGGNKAVLTLANGSKISLADVKNGEVANQSGMVITKSRDSQLVYQQTSMSSTVKEIAY
NKIETPKGGQFQLILSDGTKVWLNASSSLRYPSVFGQDERKVELDGEAYFEVAKNTAKPF
LVSSSKQIVEVLGTHFNINAYTNEPVVSTTLLEGSIKVTSPSVNAYKIIRPGQQSLIDRD
DDDSGIKVKNIDPDEAVAWKNGYFMFEKEELGSILRKVSRWYDVEIENPQGEKLDKLLFS
GTVSKYSDVSKVLRKLELTESVRFKTIGRRIIVMK
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaactcaaaaaaaattaaagacgaatttataaaggcggttaaagcttatttagaaggt
actgctgacgaaactcaattgttattcgtggaacaatacttcgatcttttcttagacacg
gaagatgttttcgaatctatggataatgatgaaatacaagatatccatgaccggatgctt
tggaagattaattatgaaattgaaaaaaaaaatagaattttccctggtaacatggagact
gtgcggtcattttcgaagtatctctacatagctgctgcggctgctttcgtaattcctatg
agtctttatatatatcaaaggaatcaggttaagccagtgagtactcaactggtcactaaa
attacacctggtggaaataaagctgttttgactttggccaatggatctaaaatatctttg
gctgatgtgaaaaatggagaggttgcgaatcaatcgggtatggttattactaaaagcaga
gatagtcaattggtttatcaacaaacctcaatgtcttctactgttaaagaaatagcatat
aataaaatagaaacccctaaaggcggacagtttcaactcattctttctgatggaacaaaa
gtctggcttaatgcatcatcttcattacgttatccttctgtattcggtcaggatgaacgc
aaagttgaattggatggagaagcctacttcgaagttgctaaaaatacggccaaacccttt
ttagtttcttcaagcaaacagatagtggaagttttgggtacgcattttaatataaatgcg
tacacgaatgaacctgttgtcagtactactttacttgaaggaagtattaaagtgaccagc
ccttcagtaaatgcttacaaaattatcaggcccggccaacaatcattaattgatagagat
gatgatgattcgggaattaaagtgaaaaatatcgatcctgatgaagctgtcgcctggaaa
aatggatatttcatgttcgagaaagaagaacttggaagtatactgagaaaggtatcgaga
tggtatgatgtcgaaatcgaaaaccctcaaggggagaaattggacaagctgttgtttagt
ggaacagtatcaaagtacagtgatgtatcgaaagtattgagaaaactggagttaacggag
tctgttcgctttaagacaatagggaggaggattatagttatgaagtga
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