Pedobacter cryoconitis: AY601_1451
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Entry
AY601_1451 CDS
T04341
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pcm
Pedobacter cryoconitis
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcm03032
]
AY601_1451
03400 DNA repair and recombination proteins [BR:
pcm03400
]
AY601_1451
Enzymes [BR:
pcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AY601_1451
DNA replication proteins [BR:
pcm03032
]
Prokaryotic type
DNA Topoisomerases
AY601_1451
DNA repair and recombination proteins [BR:
pcm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AY601_1451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
TraG-D_C
Motif
Other DBs
NCBI-ProteinID:
AMP98368
UniProt:
A0A127VBJ0
LinkDB
All DBs
Position
complement(1676028..1678658)
Genome browser
AA seq
876 aa
AA seq
DB search
MAEDLENQENDKIIKIDIDEQMKSAYIDYSMSVIVSRALPDVRDGLKPVHRRVLYGMLDL
GLANNRPYKKSARIVGEVLGKYHPHGDSSVYMTMVRMAQPWSLRYLLVEGQGNYGSIDGD
SPAAMRYTEARFQKIAEDMLADINKDTVDFQLNFDDSLKEPTVLPAKVPNLLINGSSGIA
VGMATNMPPHNITEVINATIAYIENTEITIPELMKFVKGPDFPTGAIIYGYNGVSDAFET
GRGRIVMRAKAEIETVKDRETIIVTEIPYQVNKAMMIERTAELVGEKKLEGISNIKDESN
KDGIRIVYEIKRDANASIVLNNLFKQTALQTSFSVNNIALVNGRPQMLNLKDLIRHFVDH
RHDVIVRRTKFELDEAQKRAHILEGLLIALDHLDEVIKLIRASNTPEEARTGLMEQFGLS
DIQARAILDMTLRRLTGLERDKIKEEFNELMKTIEYLQSILADEGLRMQIIKDELAEMMD
KYGDERRTTIVHSAEDMSMEDFIEDEEVVITISHEGYIKRTPATEYRTQARGGKGSKGSD
SRNEDFIEHLLIASNHNYMLFFTETGRCFWLRVYEIPEGSRLSKGRAIQNIINIPKEEKI
KAYIKVKNLKDQEYLENNYIIMCTKKGTIKKTSLEAYSRPRVNGINAININEGDQLLEAS
LTSGSSEIIMALRSGRAIRFNEATVRPMGRTATGVRGVTLGHAADEVVGMIAVDDPSATV
MVVSEKGYGKRTNVEDYRVTNRGGKGVKTITITDKTGDLIAIKAVTDADDLMIINKSGIV
IRIVLSQLRVIGRATQGVRLINLKGNDSIASVAKIEHEDDPEEEVNGELLLVDPADVLPE
EGGAEEAETEEGAEEPEEEGSDEEGEAEDTDETEED
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagatttagaaaatcaggaaaacgacaaaataataaaaattgatattgacgag
cagatgaagtctgcctacatcgattattcgatgtctgttattgtatcaagggcgttacct
gatgtacgcgatgggttaaaacctgtacaccgtcgtgtactttacgggatgcttgatctt
ggtttggccaataacaggccttacaagaaatcagcccgtattgtaggagaagtactgggt
aagtatcacccgcatggtgactcttcagtatatatgaccatggttcgtatggcacagccc
tggagcttacgttatttactggtagaaggtcagggtaactatggttcgattgatggtgac
tctccggcagcaatgcgttatacggaagcaaggttccagaaaatcgctgaagatatgctt
gcggatatcaataaagatactgtagattttcagttgaactttgatgactctttaaaagag
ccaacagtgcttccggcaaaagtaccaaaccttttaattaatggttcttcgggtattgca
gtaggtatggcaacaaatatgccgcctcacaatattacagaagtaatcaatgcgactatt
gcttacattgaaaatacagaaattactattcctgagttaatgaaattcgtaaaaggcccg
gattttcctaccggagcaataatttacggatataatggcgtttcagacgcttttgaaact
ggtagaggccgtattgtaatgcgcgctaaagctgagatcgaaacggtaaaggaccgcgaa
actattatcgttactgaaattccttaccaggttaacaaagcaatgatgattgagcgtact
gctgaattagtcggagagaaaaaactggaaggtatttctaatattaaagatgaatcaaac
aaggatggtatccgtatcgtttatgaaattaaacgtgatgcgaatgcttcaattgtattg
aataaccttttcaaacaaactgctttacaaacttcattcagtgtaaataatattgctttg
gtgaatggcagacctcagatgttaaatctgaaagatctgatcagacactttgtggaccac
agacatgatgtaattgtacgccgtactaagtttgaactggacgaggcacagaaacgtgca
cacattctggaaggtttattaattgctttagatcacttagatgaagtaattaagttaatc
agagcgtcaaatactcctgaagaagcaagaacaggcttaatggagcagtttggtttaagt
gatattcaggcgagagcaattctggatatgactttacgccgtttaacaggactggaaaga
gacaagatcaaagaagagtttaatgagttgatgaaaacgattgagtacttgcaatctatc
ttagctgatgaaggccttagaatgcagattatcaaggatgagctggctgaaatgatggat
aaatacggcgatgagcgtagaactactatcgttcactctgctgaagatatgagcatggaa
gactttatcgaagatgaagaagtcgtgatcactatctctcatgaaggttatatcaaacgt
acacctgcaactgaataccgtacacaggcaagaggtggtaaaggttcaaaaggaagtgat
tcaagaaatgaagatttcattgagcatttactgattgcttctaaccacaactatatgttg
ttctttacggaaacgggacgttgtttctggttaagggtatacgaaatccctgaaggttca
aggttaagtaaaggaagagcgatccagaacattatcaatattcctaaagaagagaaaatc
aaggcctatattaaggttaagaatctgaaagatcaggagtatctggagaacaactatatt
atcatgtgtaccaaaaaaggaacgattaagaaaacttctctggaagcttattcaagacca
agggtaaatggtatcaatgcaattaatatcaatgaaggtgaccagttactggaagctagt
ttaacgagcggatcaagcgaaatcatcatggcattgcgttccggacgtgcaatcaggttc
aatgaagcgaccgtaaggcctatgggcagaacagctaccggggtaagaggtgttactctg
ggtcatgctgctgatgaagttgttggcatgattgctgttgatgatccatcagcaacagta
atggtagtttctgaaaaaggttacggtaaacgtactaatgtagaggattaccgcgttact
aatcgtggtggtaaaggtgtaaaaacaattaccattacggataaaactggtgatttgatc
gctattaaagcggttactgatgctgatgatttaatgattatcaataaatcgggtatcgtt
atcagaattgttttgagtcagctcagggttatcggaagagcaacacaaggtgttcgtttg
attaacttaaaaggaaatgattcaattgcatctgttgcgaaaatcgaacatgaggatgat
cctgaagaagaagttaacggagagctgttgttggtagatcctgcagatgtattaccggaa
gaaggtggtgctgaagaagctgaaactgaagaaggggcagaggagccggaagaagaaggt
tctgatgaggaaggtgaagcagaggatacggacgaaacagaagaagactaa
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