Pedobacter cryoconitis: AY601_1601
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Entry
AY601_1601 CDS
T04341
Name
(GenBank) PAS sensor signal transduction histidine kinase
KO
K07652
two-component system, OmpR family, sensor histidine kinase VicK [EC:
2.7.13.3
]
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AY601_1601
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pcm01001
]
AY601_1601
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pcm02022
]
AY601_1601
Enzymes [BR:
pcm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
AY601_1601
Protein kinases [BR:
pcm01001
]
Histidine kinases
OmpR family
AY601_1601
Two-component system [BR:
pcm02022
]
OmpR family
VicK-VicR (cell wall metabolism)
AY601_1601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
PAS_3
PAS
HATPase_c_2
PAS_4
HATPase_c_3
IFT57
DUF4407
DUF4559
DUF1664
Motif
Other DBs
NCBI-ProteinID:
AMP98516
UniProt:
A0A127VAY1
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All DBs
Position
complement(1852570..1854339)
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AA seq
589 aa
AA seq
DB search
MSDVQLLDKNQLIEVLSQTKTATAIHIGEDALIQMANQAMLMIWDKDQSIIGKALEDALP
ELKGQPFPQLFKKVWLEGITISGTETAANLKVDGEIKTFYFDFEYRAIKNEFNQTICILH
TATDVTDRVINRQLMEEYYSKEVALEREQALNEELASSNEELNAVNEELSQSQEELLALN
ETLERRVEARVKELTASENKYREISDELAAINEEMAASNEELVLTHEHLKNTFDELEDKE
IALRLAIEAANFGTWHIHSESREFITSARLRELFGYDAAHEITIEEALGQITEEYRAYVA
EKLENALHGNGDYDVSYPVIGFKDKKIRWLRAVGNLKADKSGEFSSFTGVVMDISLIKKD
EQRKNDFIAMVSHELKTPLTSLNGYIQLLQRKAIVFQDNFVNSSLEMAAKQVKKMTGMIN
GFLNVSRLESGKIVLNLSHFSLTDLIGVVISESRLMEKSHNIDFQSCERTPVYADYDKIG
NVIVNLLSNAIKYAPTAKNIEVTCTIINQRVQVSVRDHGIGIGTKDINKLFDRYYRVESD
NQVSGFGIGLYLSAEIIARHNGTIWVESELGEGATFYFNLPLHNGNVEL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgtccaactattagataaaaatcaattaattgaggttttgagtcagaccaaa
accgctactgctattcatattggagaagatgcgctgatccaaatggcaaaccaggctatg
ttaatgatttgggataaagatcaatctattataggaaaggccctggaagatgcacttcct
gaactcaaaggacagcctttccctcagctgttcaaaaaagtatggttggaaggaataacc
atctcaggaacagaaacagccgctaatcttaaagtagatggagaaatcaagactttttat
tttgactttgaataccgggcgataaaaaatgaattcaaccagactatttgcattctccat
actgcgactgacgtgacagaccgggttatcaatcgccagttaatggaggaatattatagc
aaagaggtggcacttgaacgggaacaggcgctcaacgaagagctcgcttcatctaacgaa
gaactcaatgcggtaaatgaggaactctctcaaagtcaggaggagctgttagctctaaat
gaaactctggaaagaagggtggaagccagggtaaaagagctcactgcaagtgaaaataag
taccgtgaaatttcagatgaacttgcagcgatcaatgaagaaatggccgcttctaacgag
gaacttgttttaactcacgaacacttaaaaaatacatttgatgaactggaagataaagaa
atcgctttaagattagctattgaggctgcgaattttggaacttggcatatacactctgaa
agcagagaatttataacttcagcacgcttgagggaattatttggatatgacgcggctcat
gaaattactattgaagaagcacttggacaaattacagaagaatatcgggcatacgttgcg
gaaaaattggaaaatgcacttcatggtaatggggactatgatgtttcttatcctgtgatt
ggatttaaggataaaaaaatccgctggcttagagcagtaggtaatctgaaggctgataaa
tccggagaattttcttcttttactggagttgtcatggatatctcactgatcaaaaaggat
gagcagcgtaaaaatgattttatagcgatggttagtcatgaattaaaaacaccacttact
tccctcaatggatacatccagttactccagcgtaaggcaattgtatttcaggataatttt
gtaaatagttcactggaaatggccgctaaacaggttaaaaaaatgactggcatgatcaat
ggatttctaaatgtatccaggttagaatcaggaaagattgtgcttaacctgagccatttt
tctttaacagatttgattggcgtagtcatatcggagagcagattgatggagaaaagccat
aatattgattttcaaagttgtgagcgtaccccagtatatgctgattatgataagatcgga
aatgtgatcgttaatctgttgagtaatgcaattaaatatgcaccaactgctaaaaatata
gaggtaacctgtactatcatcaatcaaagggttcaggtaagtgtgagagatcacggcata
gggattggcactaaagatattaataagctatttgaccgttactaccgggtagaaagtgat
aatcaggtttctggttttgggataggattgtacctcagcgctgagattattgcccgccat
aacggtacaatttgggtagaaagtgagcttggtgaaggtgctaccttttattttaactta
ccattacacaacggaaatgttgaattgtaa
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