Pedobacter cryoconitis: AY601_1649
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Entry
AY601_1649 CDS
T04341
Name
(GenBank) Heparinase II/III family protein
KO
K20525
oligo-alginate lyase [EC:
4.2.2.26
]
Organism
pcm
Pedobacter cryoconitis
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
AY601_1649
Enzymes [BR:
pcm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.26 oligo-alginate lyase
AY601_1649
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Gene cluster
GFIT
Motif
Pfam:
Hepar_II_III_C
Alginate_lyase
Motif
Other DBs
NCBI-ProteinID:
AMP98564
UniProt:
A0A127VB86
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Position
1907467..1909602
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AA seq
711 aa
AA seq
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MNYLKKLVMGLICLIFGLSAYAQQHPSIMLTKDNIGALRKGISTYPLLGKSYKKIKSEAD
KAIKEPVNVPVPKDAGGGATHEQHKKNYLNILNCGIAYQMSGDKKYAAYVEALLLKYASE
YQKWPLHPKRKEGHQGGRIFWQSLNDFVWQVYTIQGYDLVYEAIAPAQRQQIEKGLFVPA
VKFFTEDCAETFNKIHNHATWAVAAVGMTGYVINKPEYVEMALKGTAKDGKAGYLAQIDQ
LFSPDGYYTEGPYYQRYALLPFLIFAKTINNYQPALKIFQYRKQLLAKAIETSLQLTYTD
GTFFPFNDAVKGKTYESAELVYGVDIAYADIKSQPELLDIVQKQGQVIISDAGLKIAADV
AAGKTKPFVYKTLLITDGATGKDGGIGILRAGTNEDQQAVLIKATSQGMGHGHFDRLNLL
YDDNNVEVFPDYGSARFINIESKKGGDYLPENKSWAKQTIAHNTLTVDETSNFKGNADRA
QQTAAEILYFKDDQDLKVISAAENNAYPGVKMTRTTALLKVEELQKSLMIDVFRVDADKA
HQYDLPFWYKGHLTDSSLQLKSFADQLKTLGTQYGYQHIWLNAEQAVPEQTGYLTLLNNK
RFYTVNFAAQSPVNLKLLTLGAHDPDQNLLESKAFMLSSTGSKTQTFFTVTETHGSTNTV
DETTSGSSSSVSDLKIITAGPEQISVSFKVKGKLYHYQINFKNKENFIKVN
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaactacttgaaaaagttggtaatgggattaatttgcctgatttttggactctctgct
tatgcgcaacagcatccttctatcatgctgaccaaagataatataggggcgctgaggaaa
gggatttcaacttatcccctgctcggtaaatcttataagaagatcaaatcagaggccgac
aaagccattaaagagccggttaacgtacctgttcctaaagatgcaggaggtggtgcaact
catgagcaacataaaaagaattacctcaacatcttgaattgcggaattgcttatcaaatg
tccggggacaaaaaatatgcagcctatgtagaagcattacttttaaaatatgcttccgag
tatcaaaaatggccgcttcaccctaaaaggaaagaaggtcatcagggtggcaggatcttc
tggcagagtttgaatgattttgtctggcaagtttataccatacaagggtatgatctggtt
tatgaggcaattgcaccagctcaacgtcagcaaatagaaaagggcttatttgtaccagca
gttaaattcttcacggaagattgtgcggaaacatttaataaaatccataaccatgccacc
tgggcagttgcagctgtaggaatgaccggttatgtgatcaacaagcctgaatatgtagaa
atggcgctaaaaggaacagctaaggatggtaaggcgggataccttgctcagattgaccaa
ttgttttcaccagacgggtattacacagaaggaccttattatcagcgttatgcgcttctg
ccttttttgatatttgcaaaaacgattaacaattatcagcccgcacttaaaatctttcaa
taccgtaagcaattattagctaaagccattgaaacttcccttcagctcacctatacagat
ggtacattctttccatttaacgacgcggtaaaaggaaaaacctatgaatctgccgaactg
gtttacggcgttgatattgcttatgcggatattaaatcacaaccagaattactggatata
gtccagaaacaaggccaggttattatttctgatgccgggttaaaaattgctgctgatgtg
gctgcaggaaaaaccaaaccgtttgtttataagaccctattaattactgacggtgcaact
ggtaaagatggtggtattggaattttacgggcaggaacaaatgaggaccagcaagctgtt
ttaattaaagccacttctcagggtatgggccatgggcattttgacaggcttaacttattg
tacgatgataataatgtggaagtattcccggattatggttctgcacgtttcattaacata
gaatctaaaaaaggtggtgactacctgccagaaaataagtcatgggctaagcaaactatt
gcacacaatacgctgacagtagatgaaacttcaaattttaaagggaatgcggatcgtgca
cagcaaactgctgctgaaattctttacttcaaagacgatcaggacctgaaggtaatcagc
gcggcagaaaacaatgcttatccgggggtaaaaatgacaagaactacagctttgctcaaa
gtagaagagctccaaaagtctttaatgatcgatgttttcagagttgatgcagataaagcc
catcaatatgaccttcctttttggtataaagggcacttgacagattcttctctacagctc
aaatcttttgcggatcagcttaaaactttgggcacgcaatacggttaccagcatatctgg
ttaaatgccgagcaggccgttcctgagcagacaggttacctgacattgctaaataataaa
cgtttttatacggttaatttcgcggcacagtcacctgtaaacctgaaattgctaacgctt
ggtgctcatgatccagatcagaatttattggagagcaaggcttttatgctttcttcaaca
ggcagtaaaacgcaaacgttttttacagtgactgagacacatggcagtacaaacacagta
gacgaaaccacttctggatcttcaagtagtgtaagtgatttaaaaatcatcaccgcaggg
ccggaacagatttcagtttcctttaaagtgaaaggaaaactatatcactaccagatcaac
ttcaaaaacaaagaaaactttataaaagtaaactaa
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