Pedobacter cryoconitis: AY601_2066
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Entry
AY601_2066 CDS
T04341
Name
(GenBank) Putative outer membrane protein
Organism
pcm
Pedobacter cryoconitis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
CarbopepD_reg_2
Plug
CarboxypepD_reg
STN
DUF3823
Motif
Other DBs
NCBI-ProteinID:
AMP98967
UniProt:
A0A127VCM3
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Position
2369057..2372488
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AA seq
1143 aa
AA seq
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MNNTIRWLGCIAILLWLSLFISTANAQTSQMITFGATGITFKKAFNELEKLSGMTISYNN
SQLDDQQKVNLPKAERTVAETLRLLLRNQSLTIKQTDAKNILLVNSVKGKLTGKVTDQNA
EPVPGVSIKILETAQTIQSNNDGNYSINLDPGTYTIITKYISFEDTRTEKVKVTANHNTL
LNLHLQESTNALNEVVVTALGIKREEKALGYSTKVLKTEQLTDAMSNNWTDALSGKVAGL
NLIRSNGGPAGSNKIILRGESNLTGENDALIVVDGVVINHGSGRTTGSGSSAYLQGESPI
DFGSGLNDINPDDIENVTVLKGPGAAALYGQRGANGAIIITTKSGKKRNGIGVTVNSNTA
METISRWPDYQYEYGQGNDGANFYSFGATEDGPSTRSTSSAWGPKFNGQSFFQYDPITKT
AGKERTPWLPYKNSRKDFFQSGRTFTNSVTLDGGNDQTTFRLSLTNVDNKWIIPNTGYGR
NTVALSATHKVNEKLQVATKVNYTNKFSDNLPSTGYNNQSIMYWNMFWLPSADAGWLKDY
WAPGKENVAQSYPFSSYPDNPYLIAHEMLNKSNRNALTGNVQATYNFSKNLSLMIRSAMD
FSYDARSQQRPFDTEKFKKGMFRTQNIFSQEISNDFLIHYNKDLNKDLKISVSAGGSMLK
NTYNKDELRADSLTYPGIYSLANSAGVLTPKPYRGKYGINSFYGVATASYKDYLFIDVTG
RNDWNSVLATAKSTDNVSFFYPSVNLSGILSEIFKLPKFISYAKLRASVAGVGSGQQTPY
ITSFTYDVADNFPGGLQNPTVLTNTNLKPLYTTSYEVGTDLRFLNNRLGINIALYKSDTK
DQILKTTVDRSSGVSYAYVNAGKVRNKGIEVELNGTPIDQKDGFKWTVFGTFTANRNKII
ALTDSLDNLILQSGPASRGAIVAKIGGSMGDLYGRGYKRSPDGQIVYNNGYPVIPDDQLY
IGNTNPKWKASLGNQFRYKNFGMSFLVDAQYGAVGYSLTAAVLAEQGKTTNTLPGRYNGI
IGKGVVQNPDGSYSPNTVIAQDMTTYYTTHYGRDNIEGATYSTDFIKLREARFDYTFKPK
TLRRFGLQRATIGIYGRDLMTITKWPGFDPEFGTLNDGTINQGFELGQFPATRTFGINLN
IGI
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgaataatactattcgatggctcggctgtatagcaattttattgtggttaagcctgttt
atcagtacagcaaacgcacaaacaagccagatgattacctttggcgcaacgggtatcacc
tttaaaaaagcctttaacgagctcgaaaagctgagtggcatgaccatcagctataacaac
agccagttagacgatcagcaaaaggtcaacctgccaaaagcggaaagaacagtagcagaa
acattgcgcctgttacttcgcaaccaatccttaaccattaaacaaacagatgctaaaaac
atcctgctcgtcaacagtgtaaaagggaaactgacaggaaaagtaaccgatcaaaatgct
gaaccagttcccggtgtatccatcaaaatactcgaaactgcacaaactatccagtccaat
aatgacggaaactacagtattaaccttgatccgggaacttataccatcatcaccaaatac
atctcttttgaggatacccgtaccgaaaaggtaaaggtcacagctaaccataacacctta
ttaaaccttcatttgcaggaatctaccaacgccttaaatgaagtcgtagtcacagcgctc
ggcatcaaaagagaagaaaaagcgcttggttattccaccaaagtcttaaaaaccgaacag
ctgaccgatgccatgtccaacaactggacagacgcgttgtccggtaaagttgccggttta
aacctgatcaggtcaaacggtggccctgcgggctcaaacaagatcatcctgcgtggagaa
agtaacctgaccggagaaaacgatgccttaattgtagtggacggtgtggtgatcaaccat
ggcagcggcaggactacaggaagtggcagctctgcctatttacagggcgagtcccctatt
gactttggcagtggtttaaacgatatcaacccagacgatatagaaaatgtaaccgtatta
aaaggtccgggagccgctgctttatacggacagcgcggtgcaaatggtgcgatcatcatt
accactaaatctggtaaaaaaagaaacgggatcggggtaacagtcaactcgaataccgct
atggaaactatttcccgctggccagattatcagtacgaatacggacagggaaacgatggc
gccaacttttactccttcggtgcaacagaagatggcccaagtaccagaagtacaagttct
gcctgggggcctaagtttaacggacaatcctttttccagtatgacccgatcactaaaact
gcaggaaaagagagaacgccatggcttccctataaaaattcaagaaaagatttctttcag
agcggccgtactttcacgaacagcgtaaccctggatggtggaaatgaccagaccactttt
cgcctttcgctaaccaatgtagacaacaaatggatcattcccaatacaggttacggccga
aacaccgtcgccctgtctgctacccataaagtaaacgagaaacttcaggtcgcaaccaaa
gttaactatacgaacaagtttagcgataacctcccttctactggttacaacaatcagtct
atcatgtactggaacatgttctggttacctagcgcagatgccggatggttaaaagattat
tgggctcccggaaaagaaaatgtagcacagagctatccttttagcagttatcctgacaat
ccttatctgattgcccatgaaatgctcaacaaatctaaccggaatgcactaaccggaaat
gtacaggccacttataatttctctaagaatttaagcctgatgattcgcagtgcgatggat
ttctcttatgatgcccgttctcagcaacgtccatttgataccgagaagttcaaaaaagga
atgttcaggacacaaaacatcttctctcaggagatttccaatgactttttaatccactac
aacaaagacctgaacaaggatcttaagatctcggtttctgccgggggcagcatgttaaaa
aacacttataacaaagacgaactgcgtgcagattcgcttacctatcccggtatttatagc
ctggcgaacagtgcaggtgtgttaacgccaaaaccttaccgtggtaaatatgggatcaac
agtttttatggcgtcgcaacagcaagttataaagattacctatttatagatgttacaggc
cgtaatgactggaacagtgtactggcaacggcaaaatctacggataatgtttcctttttc
tatccttcggtaaacctgagtggcatcttgtctgaaatatttaaactgccaaaattcatc
tcctatgctaaattaagggcttcggtagcaggtgtgggcagtggccagcaaaccccttat
atcacttctttcacttatgatgtagccgataattttcccggtggactccaaaatccaacc
gtattaaccaataccaatctgaaacctttatataccacaagttacgaagtaggtactgat
ttgaggttcttaaacaaccgcctgggcatcaacattgccttgtataaaagtgacaccaag
gatcagattctgaaaaccactgtagaccgttcttcgggcgtaagctatgcttatgtaaac
gccggaaaagtgcgtaacaaagggatagaagttgaattgaatggtacaccgatagatcag
aaagatgggttcaaatggacagtcttcggaacttttaccgctaacagaaacaagattatc
gctttaactgatagtctggataacttgattttacaatccgggccagccagccgcggtgca
attgtagctaaaattggcggcagcatgggtgatttgtatggccgtggttacaaacggtcg
ccagatgggcagattgtctataacaatggttacccggtcatccctgatgatcagctttat
attggcaataccaaccctaaatggaaagcgagtttaggcaaccagttccgttataagaat
ttcggaatgagtttcctggtggatgcacaatatggtgcagtaggttattcactcaccgca
gccgttttagctgaacaaggaaagacaacaaatacgcttccgggacgatacaacggaatt
attggtaaaggtgtagtgcaaaatccagatggcagttatagcccgaacacggtaatcgca
caagatatgactacttattatactacgcattatggtcgggataatattgagggagctacc
tattctactgattttatcaaactccgcgaagccagatttgactacacttttaaaccaaaa
acactgagaagattcggtttacaaagggctacaattggtatttatggccgtgatttgatg
accatcacgaaatggccgggctttgatcctgagtttgggacactaaacgacggtaccatt
aaccagggttttgagctgggtcagttccctgctacccgaacttttggaatcaatttaaac
ataggtatttaa
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