Pedobacter cryoconitis: AY601_2123
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Entry
AY601_2123 CDS
T04341
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm00521
Streptomycin biosynthesis
pcm00523
Polyketide sugar unit biosynthesis
pcm00525
Acarbose and validamycin biosynthesis
pcm00541
Biosynthesis of various nucleotide sugars
pcm01100
Metabolic pathways
pcm01110
Biosynthesis of secondary metabolites
pcm01250
Biosynthesis of nucleotide sugars
Module
pcm_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
AY601_2123
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
AY601_2123
01055 Biosynthesis of vancomycin group antibiotics
AY601_2123
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
AY601_2123
00525 Acarbose and validamycin biosynthesis
AY601_2123
Enzymes [BR:
pcm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
AY601_2123
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
adh_short
NmrA
PWP3A-B_C
Motif
Other DBs
NCBI-ProteinID:
AMP99024
UniProt:
A0A127VCJ7
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Position
complement(2446832..2447890)
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AA seq
352 aa
AA seq
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MMTKKILITGGAGFIGSHVVRRFVKNYPDYQIVNLDKLTYAGNLLNLTDVEDAPNYRFVK
GDIVDAAFITELFRTEQFDAVVHLAAESHVDRSIANPMEFVMTNVIGTVNLLNAAKEHWK
GDYAQKRFYHVSTDEVYGALGETGMFTETTAYDPHSPYSASKASSDHFVRAYHDTYGLDA
VISNCSNNYGSHHFPEKLIPLAINNIKNNKAVPVYGKGENVRDWLWVEDHARAIDVIFHQ
AKAGETYNIGGHNEWKNIDLIKLLCKIMDQKLGRSSGTSEQLITYVTDRAGHDLRYAIDS
SKLQEKLDWVPSLQFEEGLAKTVDWYLENEQWLDDVTSSNYQSYYETQYAER
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgatgactaagaaaattttaattaccggtggtgccgggtttatcggttcccatgtagtg
cgcaggttcgtgaagaactatcctgattaccagattgtaaaccttgataaattgacttat
gcagggaatcttttaaacctgactgatgtagaggatgcgccaaattacaggtttgtaaaa
ggtgatattgtggatgctgcatttataactgaactattccgtacggagcaatttgatgcc
gttgttcatttggctgctgaatcacatgttgaccgctctatcgctaatccgatggaattt
gtaatgacaaatgtgattggtacggttaatcttttgaatgcagcaaaagagcattggaaa
ggtgactatgcgcagaagcgtttttaccacgtatctacagacgaagtttatggagcgctc
ggtgaaacggggatgtttacagaaactactgcttatgatccgcatagcccgtattctgca
tctaaagcgagttctgatcattttgtgcgtgcttaccatgatacttatggtctggatgcc
gtgatttccaactgttcaaataactatggttctcatcattttccggaaaaattgattccg
ctggcgattaataatattaaaaataataaggcagtccctgtatatggtaaaggtgaaaat
gtaagagactggctttgggtagaagatcatgcccgtgctattgacgttattttccatcaa
gccaaagcaggtgaaacttacaatatcggcggtcataatgagtggaaaaatattgacctg
attaaattgctttgcaagattatggatcagaaacttgggcgttcatccggtacatccgaa
caattgattacttatgtaaccgatcgcgcaggtcatgatttaagatatgcaattgattcg
tcaaaacttcaggagaaattagactgggtcccgagtcttcagtttgaagaggggctggct
aaaacagttgattggtatcttgaaaatgaacaatggctggatgatgtgacttcatcaaat
tatcagtcttattatgaaactcaatacgcagaaagataa
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