Pedobacter cryoconitis: AY601_2268
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Entry
AY601_2268 CDS
T04341
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm00300
Lysine biosynthesis
pcm00470
D-Amino acid metabolism
pcm01100
Metabolic pathways
pcm01110
Biosynthesis of secondary metabolites
pcm01120
Microbial metabolism in diverse environments
pcm01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AY601_2268
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AY601_2268
Enzymes [BR:
pcm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AY601_2268
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
TssR_VWA
Motif
Other DBs
NCBI-ProteinID:
AMP99163
UniProt:
A0A127VCS9
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Position
complement(2706342..2707496)
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AA seq
384 aa
AA seq
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MFSNKDIAQFADLETPFYYYDLSLLQRSLSACVEAAKVYDFHVHYAMKANFNDTLLKKIK
EAGLGADCVSGNEVKKAIEVGFDKKKVVFAGVGKSDKEINGALDLDIFCFNVESVQELAV
INELAEKRGKVAKVAIRINPNVDAHTHHNITTGLDENKFGVNSWDLPDCAEVLKVSANLE
FIGIHFHIGSQITNLDVFKNLCVRINEFAKWFEERGFPVKVLNVGGGLGIDYQNPEQQIP
DFAAYFKIFNDFLEKRPNQEVHFELGRAIVGQCSSLISRVLYVKNGKSKNFIILDAGMTE
LMRPALYQAYHQIENLSKQDGEASVKYDVVGPICESTDCFGKEVLLQETVRGDLIGIRST
GAYGEVMSSHYNLRENVRVAFSER
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgaacaaagatatagcacagtttgcagatttagaaacacctttttattattat
gacctgagtttattgcagcgcagcttaagtgcttgtgttgaagcggctaaggtatatgat
tttcacgtgcattatgcaatgaaagcgaattttaatgatacgctgctgaaaaaaattaaa
gaggccggtttgggcgctgattgtgtaagtggcaatgaggtgaagaaggctattgaagta
ggttttgataaaaaaaaggtcgtatttgctggtgtaggtaagtcggacaaggaaatcaat
ggtgcactggatctggatattttctgctttaatgtggagtctgttcaggagttagcggtg
atcaatgaacttgctgagaaaaggggtaaagtggctaaggttgcgatccgtattaatcct
aatgtcgatgcacatacgcatcataatattacaaccggactggatgagaataagttcggt
gtaaattcatgggatcttcctgattgtgcggaagttttaaaggtttctgcaaatttagaa
ttcatagggatacatttccatattggttcacagatcacgaatttggatgtttttaagaat
ctttgtgtaaggatcaatgagtttgcgaaatggttcgaggagcgtgggtttccagtaaag
gtgttaaatgttggtggtggattgggtattgactatcagaatcctgagcagcagattcct
gattttgcagcttattttaagatatttaatgactttttagagaagaggcctaatcaggag
gttcattttgagctgggaagagcgattgttgggcagtgttcttcgttgattagcagagtg
ctttatgtgaagaatgggaagagcaagaatttcataattctggatgctgggatgacggag
ttaatgagaccggctctttatcaggcttatcaccagatcgagaatttgagtaagcaggat
ggggaagcgagtgtgaagtatgatgtggtgggcccgatttgcgagagtacggattgtttt
gggaaagaggttttgttacaggagacggtgaggggtgatttaatagggatcaggagtact
ggggcttatggtgaggtgatgagttcacattataatctgagggaaaatgtaagggtggct
tttagtgaaagatag
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