Pedobacter cryoconitis: AY601_2393
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Entry
AY601_2393 CDS
T04341
Name
(GenBank) Alpha-L-fucosidase
KO
K01206
alpha-L-fucosidase [EC:
3.2.1.51
]
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm00511
Other glycan degradation
pcm04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
AY601_2393
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
AY601_2393
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcm04147
]
AY601_2393
Enzymes [BR:
pcm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
AY601_2393
Exosome [BR:
pcm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
AY601_2393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha_L_fucos
F5_F8_type_C
F5_F8_type_C_2
DUF7402
DUF3999
DUF3474
GHL6
Motif
Other DBs
NCBI-ProteinID:
AMP99287
UniProt:
A0A127VDH9
LinkDB
All DBs
Position
2847298..2849211
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AA seq
637 aa
AA seq
DB search
MRLFNKQHLLILSAILLSTGTYAQQLAGAPEPYGAIPTERQLKWQETEMYCIIHFTPTTF
QNKEWGYGDADPSIFNPTKFNALQIVSAAKSGGFKGIVYVAKHHDGFALWPTKTAAYNIS
ESPWKNGKGDMVREFQQAAKQTGMKFGVYCSPWDRNNPDYGTPAYLTIYRNQLKELYTNY
GELFMSWHDGANGGDGSYGGKNEKRQVDQSTYYDWLNTWEITRKLQPNASIFSDIGLDVR
WVGNEKGIAPETSWSTITLKGNENKPPMPGFLQDSNLGSGTRNGEQWIPFEGDVSLRPGW
FYHAEQDGQVKTVAELFNIYCKSVGHGGALDLGLSPTTEGILHPKDVSTLAAFGKLLQQV
FANNLAKEAKISLSDIRNKQPGEFGAANLTDANRYSYWATDDAVHTAWAQLDFKKPVQFS
IVQLRENIKLGQRIDSVAVEVFKNNRWEILAKATSIGANRIIRLPQPETSAKIRIHVYAP
VAITLSEIGLYLEPALKSEDTQTTDSAYPKTNWKASVSNPSATAQLKNSIDNNKSTYFET
KSNNYIDFDFGKPLVFSVVGYLPGQDGTAIGAIEKYEVFSSEDGKNWQKIAIGEFSNIKA
NPILQRITLAAKTTARYLRLQNSENGIIRIAELEVYK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaggttattcaacaaacagcatcttttaatcctatctgctattttattatccacgggc
acttatgcccagcaactggccggcgcaccagaaccttatggcgctattcctacagagaga
cagctcaaatggcaggaaacagaaatgtattgtatcatccacttcactcctacgaccttt
caaaacaaagaatggggctatggagatgctgacccttccatatttaaccccactaaattc
aatgcccttcaaattgtcagcgctgctaaatcgggaggttttaaagggatcgtatacgtt
gctaaacaccatgacggtttcgcactttggcctacaaaaactgcggcctataatattagt
gaaagcccatggaaaaacggtaaaggcgatatggtcagagaatttcagcaggcagcaaag
caaacagggatgaaattcggagtttattgttccccatgggaccggaacaaccccgattat
ggaacaccagcttacctcactatttaccgcaatcagcttaaagaactttataccaattat
ggggagctgtttatgagctggcatgatggcgcgaatggtggagacggttcttacggagga
aaaaatgagaaaagacaagtagaccagtccacctattacgactggctgaatacctgggaa
attaccaggaaactgcaaccaaatgctagtattttcagtgatattggtctggatgtacgc
tgggtaggaaatgaaaaagggattgcaccagaaacaagctggtctaccattaccctgaaa
ggaaacgaaaataaaccaccgatgcccggtttcctgcaagattcaaacctgggcagcggt
acaagaaatggggaacaatggataccgtttgagggtgatgtatcactgcgtccgggatgg
ttttaccacgctgaacaagatggacaggttaaaactgtagctgaattatttaacatttat
tgtaaatcagttggtcatggcggggcactggatcttggactttccccaacaaccgaagga
attcttcatccaaaagatgtcagcaccctggctgcattcggaaaattacttcaacaggta
tttgcaaataatctggctaaagaagctaaaataagcctctctgatatacggaacaaacaa
ccaggcgaatttggtgcagccaacctgactgatgcaaacagatacagttattgggccaca
gatgatgctgttcacacggcatgggcacaacttgattttaagaaacctgtgcaattcagt
attgtgcaactccgcgaaaatattaaactcggacaaagaatagatagtgtggctgtagag
gtgtttaaaaacaaccgttgggaaatactggcaaaagcaaccagcattggtgctaacaga
ataatccgtttgcctcaacctgaaacctctgcaaagatccgtatccatgtttatgcgccc
gtagcgatcactttaagtgaaattggcctttacctggagccagcgcttaaatcggaagat
acgcaaacaacagacagtgcttatcccaaaacaaattggaaagcgtctgtttcaaatcct
tcagctacagcacaattaaaaaacagtatagacaataataaatcaacctattttgagacc
aaaagcaataactatattgactttgattttggcaaaccgctggtattttcggtcgtaggt
tacctgcccggacaagacgggacagcaatcggagctattgaaaaatatgaagtattcagt
agtgaagatggtaaaaactggcagaagattgccatcggggaattttcaaatattaaggct
aaccctattttacaacggatcacactagctgcaaaaacaacagcaagatatctgagatta
caaaatagtgaaaatggaataatccgtattgcagaactggaagtttataaatag
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