Pedobacter cryoconitis: AY601_2423
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Entry
AY601_2423 CDS
T04341
Name
(GenBank) Putative anti-sigma factor
KO
K07165
transmembrane sensor
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AY601_2423
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FecR_C
FecR
DUF5658
STN
Motif
Other DBs
NCBI-ProteinID:
AMP99314
UniProt:
A0A127VDD7
LinkDB
All DBs
Position
complement(2882616..2883581)
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AA seq
321 aa
AA seq
DB search
MKSSEKKKLYRRFLEKELNAAELDEFFLLVENGEFDLDYLDMMPAVEGQKMEIQVIAEEN
PVIASPVKIRPVFRLFIKVAVAASLLLVSTLGYLAHRKAESLKQQTSFTTVTVPVGSVKI
ITLTDHSVVTLNSGSVFKYPAAFAANNRKVFLIKGKGFFEIAKDKHRPFTVYSAKLSTTA
LGTSFTVENYKNYQLEKIRLYTGKVEIGSQQKGFTALRLTPGQQYSQVGDAGEKSVFDKI
GQIKPYTEDGTLEFDNTSLTEALAQVASYYNITLQFEKQDLKGFAINGRFRNEPVKDVLK
TLLFTHHLKFKKIPEGYVIMN
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgagcgagaaaaagaagctataccgtaggtttcttgaaaaagaattgaatgca
gcagagctggatgagtttttcctgttagtagaaaatggagaatttgatttagactacctg
gatatgatgccagcggttgaaggacagaagatggaaatccaggtaattgcagaagaaaat
ccggtaattgcttcaccagttaaaataagacctgtattcaggctttttatcaaagtagca
gttgcagcatccttattgctggtttccactttaggatatttagcacatcgcaaggctgaa
agcctaaaacaacaaacttcgtttaccaccgtcactgtacctgtaggttcggttaaaatt
attacgctgacagatcactctgtggttaccctaaactctggttccgtatttaaatatccg
gcggcattcgctgcaaataaccgtaaagtattcctgattaaaggaaaaggtttttttgag
attgcgaaggataagcatagaccttttactgtgtattcagcaaaactatcaactacagct
ttaggcacttctttcaccgtagagaactataaaaactatcagctggaaaaaatacgctta
tatacaggtaaggttgaaataggcagtcagcaaaaaggctttacagctttaaggctgacc
ccaggacagcaatatagccaggttggcgatgcgggcgaaaaatcagtatttgataagata
gggcaaattaaaccttatacagaagatggtacactggaatttgacaatacaagtttgacg
gaggctttagcgcaagtagcctcttattataatattacactgcaattcgaaaagcaagat
ttgaaaggctttgctattaatggcaggtttagaaatgaacctgttaaagacgtacttaaa
acactcttatttactcatcatttaaagtttaaaaaaatccctgaggggtatgttattatg
aattga
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