Pedobacter cryoconitis: AY601_2505
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Entry
AY601_2505 CDS
T04341
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AY601_2505
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcm02000
]
AY601_2505
Transporters [BR:
pcm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AY601_2505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
oligo_HPY
AAA_22
AAA_21
AAA_16
AAA_29
NB-ARC
TniB
AAA_5
ATP-synt_ab
PRK
NACHT
AAA
ResIII
TsaE
Motif
Other DBs
NCBI-ProteinID:
AMP99394
UniProt:
A0A127VDL8
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All DBs
Position
2977042..2978760
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AA seq
572 aa
AA seq
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MLNVIDLNIQFFNQEDRSWQTAVNQISFKAERGRVLGIVGESGSGKSVTSFAIMRLHDPL
YTKISGDILFNEISLLSLSDKEMNTYRGNKIAMIFQEPMTSLNPVFTCGNQVQEAIMLHQ
SLSKQAAKEKTIELFKEVQLPRPETVFDTYPHQLSGGQKQRVMIAMALSCNPEFLIADEP
TTALDVTVQQTILQLLLKIKEERNMGMIFISHDLAVISEIADDVAVMYKGTIVEQGSLEQ
LFKNPKHPYTKGLLACRPSPLYRLKKLPVVADFLKQGTDQPIAHLLAINSYTQQEIDSRR
AVLYATPPLLKVHHLCTWFPVRNGLFGSAKEVVKAVDDVSFKLYPGETLGLVGESGCGKT
TLGRTILRLIEPSSGSIIFDGQDITHLKKEKLRALRRDIQLIFQDPYSSLNSQLTVGNAL
MEPLQVHGVFNSNAERKAHVQHLLELVDLKPEHFNRYPHEFSGGQRQRIVIARALALQPK
LIICDESVSALDVSVQAQVLNLLRRLQQEMGLTYIFISHDLAVVKHLSDRMIVMNKGKIE
EEDFPEIIYEHPQTAYTQKLIAAIPGKLSLAR
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacgtaattgatctgaatatccagttttttaatcaggaagaccgctcctggcaa
accgcagttaaccagatcagtttcaaagctgaaagaggacgggttttagggatagtcggc
gagtccggctctggaaagtctgtgacctctttcgcgattatgcgtttacatgatccgttg
tacactaaaattagtggagacattctttttaatgaaatcagcctgctttccttatccgat
aaggaaatgaatacttataggggcaataaaattgccatgatttttcaggaacccatgacc
tctctgaatcctgttttcacttgtggcaaccaggttcaggaagcaattatgctccaccaa
agtctgagtaaacaagctgcaaaagaaaaaacaattgaacttttcaaggaagtacaactg
ccccgtccggagacagttttcgatacctatccgcaccagctttcaggcggacaaaaacaa
agggtaatgattgcaatggctttaagttgcaaccctgaatttctgattgccgatgagcct
accactgcattggatgtaacggtacagcaaacgattctgcagttattgcttaaaataaaa
gaagaaaggaatatgggaatgattttcatctctcatgatctggcagtgatcagtgaaatt
gctgatgatgtagctgtcatgtacaaagggacaattgtagaacaaggatcgctggaacag
ctctttaaaaatccaaaacatccctatacaaagggtttgctggcttgcaggccctctcct
ttataccgtttaaaaaaattgccggtcgtagccgatttcctcaaacagggcacggatcag
ccgattgctcatttgctggccataaatagttatacgcaacaggaaattgacagcagaaga
gcagttttgtatgccacacctcccctgctcaaagtgcatcatctttgtacgtggttcccg
gtcagaaatggtttgttcggttctgctaaagaggtggttaaagcggtagatgatgttagt
ttcaaactttatccaggagaaacactgggtttggttggtgaatcaggttgtggtaaaact
acgctcggcagaactattttacgtctgattgagccttcttccggctcaattatttttgac
ggacaagatattacacatttaaaaaaggaaaagctccgtgcactgagaagagatatacaa
ctcatttttcaagatccctactcttctttaaattcgcagcttacagtaggaaatgcatta
atggaacctttgcaggtacatggtgtgtttaacagtaatgcggaacgtaaagcacatgta
cagcatttactggaattagtggatctgaaacctgaacattttaaccgttatcctcatgaa
ttttcaggaggccagcggcagcgtatcgtgattgcccgtgcgcttgcacttcagcctaaa
ctgattatctgtgacgaatctgtctctgcactggatgtttctgtacaggcccaggtgtta
aatttactgagaaggttacagcaggaaatgggtttgacttatatttttatttctcatgac
cttgcagttgttaaacacctttcggacagaatgattgtgatgaataaaggaaaaatagag
gaagaagattttccggaaatcatctatgaacatcctcagaccgcttacacgcaaaagttg
attgctgcgattccggggaaattaagccttgccaggtag
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