Pedobacter cryoconitis: AY601_2558
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Entry
AY601_2558 CDS
T04341
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AY601_2558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcm03400
]
AY601_2558
Enzymes [BR:
pcm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AY601_2558
DNA repair and recombination proteins [BR:
pcm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AY601_2558
Prokaryotic type
AY601_2558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AnkX_ins
Motif
Other DBs
NCBI-ProteinID:
AMP99447
UniProt:
A0A127VDX9
LinkDB
All DBs
Position
3033090..3033767
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AA seq
225 aa
AA seq
DB search
MSAALEPGWLKVLEPEFEKEYMKNLKAFLLQEKETGKTVYPKGADIFAAFNHTPFDKVEV
VILGQDPYHGDGQAHGLSFSVQKGVATPPSLKNIYKELETDIAGFKTPNHGNLTQWADEG
VLLLNASLTVRAHEPGSHQGKGWEAFTDQAISQLSDKKTGLVFLLWGKFAQQKAVLIDEK
KHTVLKSAHPSPFSAYTGFFGSKHFSKTNEILIAEGKKQINWQIS
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagcattagaaccaggctggttaaaagtactggaacctgaatttgaaaaagaa
tacatgaaaaacctgaaggcctttctcctgcaggaaaaagaaacaggaaaaacagtgtat
ccgaaaggtgcagatatttttgcagcctttaaccataccccttttgacaaagtagaagtg
gtgatcttaggtcaggacccctaccatggagacgggcaggcacacggactttccttctcc
gtacaaaaaggagtagccacgcccccatctttgaagaatatttataaagaactggaaaca
gatatagcagggtttaaaacaccaaatcacggtaaccttacccaatgggctgatgaaggc
gtattattactgaacgcatcccttacagttcgcgcacacgaaccaggttcccatcagggt
aaaggctgggaagcatttactgaccaggctatcagccagctttctgataaaaaaacagga
ttggtgtttttactatggggtaagtttgcacaacaaaaagctgtactgattgatgaaaag
aaacatacagttttaaaatctgcacacccctcgccattttctgcttacaccggatttttt
ggtagtaaacatttctcgaaaacaaatgaaattctgattgctgaaggaaagaagcaaatt
aactggcagatcagctaa
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