Pedobacter cryoconitis: AY601_2693
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Entry
AY601_2693 CDS
T04341
Name
(GenBank) hypothetical protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm02010
ABC transporters
pcm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AY601_2693
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AY601_2693
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcm02000
]
AY601_2693
Transporters [BR:
pcm02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
AY601_2693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
AMP99578
UniProt:
A0A127VF74
LinkDB
All DBs
Position
complement(3192910..3194061)
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AA seq
383 aa
AA seq
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MKIGVLLPNSTTYPLISPNFMTGLKGSLADLAIALSPELLTASIGFGTDGKLMLKEAEVM
LLDNQADVLIVFADHPVVECLFPLINALKKLLIVVNSGAKYPPVKKQPFVIYHTLNYSLH
CRLIGKQAAKVSSKAVMATSYYDGGYSLCHAISKGYMDQGSSIAFNFVSKFKAEEFDMVP
MTDFLNANHDVRHILAVYSDLSQVFYEKLAIDFPAIPLNVFVNPAMLEEPHLPEYGITNK
EMSVSSYVPWMPQLTTGGNIAYCNVFKSKSGRIPDAFGALGWDTGVLLIKYIMVSLENPL
FNTKQLLNELLDTEIDGAKGQICIDSNTHQVFSPAYQVKLGAGNQLILQDTVPLVEVLRE
WTEIYDDPPQGLVSGWMNTYMCS
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataggtgtactgcttccgaattctacgacttatccgctgatctctcctaatttt
atgactgggttaaaaggtagtttggctgacctggcaatcgctttatcacctgaactgtta
actgcaagtattggttttgggacggatggaaagctgatgctgaaggaagcagaagttatg
ctgctggataatcaggcagatgtgctcattgtttttgctgatcatccggtagtggaatgc
ttattccctttgattaatgcactgaaaaaactgctgattgtggtcaatagtggtgctaag
tatcctcctgttaaaaaacagccctttgtaatttaccatacgctcaattattcattgcat
tgccggctgattggtaaacaagctgctaaagtgagcagtaaagctgtaatggccacttct
tattatgatggaggttatagcctttgtcatgcgatcagcaaaggttatatggatcaggga
agttcaattgcctttaattttgttagtaaattcaaggctgaggaatttgatatggtccct
atgactgattttctgaatgcaaatcatgatgttcgccatattctggctgtttacagcgat
ttaagtcaggtcttttatgaaaagcttgcgattgattttccagcaattcctttaaatgtc
ttcgttaacccggcaatgcttgaagaaccgcatctgccagaatacgggataaccaataaa
gaaatgtctgttagttcttacgtgccatggatgcctcaattaacgacgggcggaaatatt
gcttattgcaatgtttttaaaagtaaatccggccgtatacctgatgcttttggggcattg
ggatgggataccggtgttttattaattaaatatatcatggtttctttagagaatccactt
ttcaatacgaaacagttattaaatgaactgctggatactgaaattgatggagcgaaagga
caaatctgcatagatagcaatacacatcaggtgttttcaccagcataccaggtaaaactt
ggagctgggaatcaactgatcttacaagatacagtgcccttagttgaggtacttcgcgaa
tggactgaaatatatgatgatccacctcagggattagtgtcaggatggatgaatacttat
atgtgctcttaa
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