Pedobacter cryoconitis: AY601_2783
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Entry
AY601_2783 CDS
T04341
Name
(GenBank) hypothetical protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AY601_2783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcm03021
]
AY601_2783
Transcription machinery [BR:
pcm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AY601_2783
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_ECF
GerE
Sigma70_r2
HTH_40
Sigma70_r4
HTH_24
HTH_5
HTH_10
HTH_11
HTH_23
PF0610-like_N
UPF0122
HTH_Tnp_ISL3
HTH_20
HTH_AsnC-type
PCI
DUF2774
Get5_C
HTH_69
HTH_25
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AMP99666
UniProt:
A0A127VE84
LinkDB
All DBs
Position
complement(3309309..3309845)
Genome browser
AA seq
178 aa
AA seq
DB search
MEILRVNMGDKLLNQIDDASFRALFDLYWKPLVAFCQHHIKDDEIAMDIVQDIFHSLWRR
RDGLQIETRMEYYLFRAARIKVSDYYREKFKRENQNHCLSENFCERINNTEETILFRDLD
HFVDGLVNRLPCRCKQVYTLSRNSGLSIPEIAEQLEISEKTVEAHLTKALRFLKTYLH
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
gtggaaattctaagggttaatatgggtgataaattgctgaatcagatcgacgatgcaagt
tttcgtgccttgttcgatctgtattggaagccactggttgctttttgtcaacaccatatc
aaggatgatgagattgctatggacatcgtccaggatatctttcattctctctggagacgc
agagacggtcttcagatcgaaacacgtatggaatattatttgttccgtgcggcccgtatt
aaagttagtgactattaccgtgaaaaatttaaacgagagaatcagaaccattgcctttca
gaaaatttctgtgaaaggattaacaatacagaggaaaccattctcttcagagatctggat
catttcgttgatggactagttaacagactgccctgcaggtgcaaacaagtatatacttta
tcccggaatagtggcctgagtatacctgaaattgctgaacagcttgagatttctgaaaaa
actgtagaagcacatttaaccaaagcgttacgctttcttaagacttatttgcattaa
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