Pedobacter cryoconitis: AY601_2800
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Entry
AY601_2800 CDS
T04341
Name
(GenBank) Collagen-binding protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
pcm
Pedobacter cryoconitis
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcm02000
]
AY601_2800
Transporters [BR:
pcm02000
]
Other transporters
Pores ion channels [TC:
1
]
AY601_2800
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Plug
TonB_dep_Rec
CarbopepD_reg_2
SopD
DUF3005
MetallophosN
Motif
Other DBs
NCBI-ProteinID:
AMP99682
UniProt:
A0A127VEB6
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All DBs
Position
complement(3333420..3336395)
Genome browser
AA seq
991 aa
AA seq
DB search
MKAKNEHYHGSGKRIWILLLFLLPCQLYAQNTITVKGTVSDVKDGTTLVGVSIKEKGTSN
VVSTDTKGGYSLKVKNAAAVLVFSYIGYQSQEIALNGRASLNAMLSVESTGLDEVVVVGY
GTQKRGEVTSSIATVKAEDFTKGTVRDAGQLIQGKVAGLRITTPSGDPAGSTQINLRGLN
SINGTSEPLILIDGIPGSLNTVAPEDIEAIDVLKDGSAAAIYGTRATGGVILITTRKNPT
GSKSTIEYTNYANIQKIAKKPEMLTADDYRRLNSQGAKYTDYGGSTNWLDEILQNPVSQN
HNLSIFGGNSTTNFSGSVNYRDWEGIFLRTGQKRLTVRAALNHSMFDDKLKTNITVINRS
ITSSQGGADGYAYRQAIIRNPTDHIYNDNGKWQERDIYFYDNPLSRINEATNDARLRQTR
ISGSLDYRPVKDLSLKLLASNIQNNNLYGNSTTFEHVNTTKSKLNGTASRSTDSGNENLV
EFTANYTKSIGLHNFSVLGGYSWQDAVSENFYAYNFDFPTDAYSYNNLQTGAGLKAGKAD
MTSDKSKWQLAGFFSRLTYNWNEKYLFMASIRREGSSKFGANYHWGSFPAASVGWRVTKE
DFMQHIPEISDLKLRAGYGVTGTIANNPYQSQTSYKYDYGEGAFIDGKWVPGFVPARNFN
PDLRWEKKKEYNAGLDFGLFKNRITGSLDYYSRTVEDLIYNFSVPMPPYLTNSMLINAGT
MKNSGFEALINVKAIDSKLLKWNSSITYSTNKNKLVNLSNDKFDVTVGFFDAGYTGEPIQ
TNTHRVRVGGPIGQFFVLKSVGVDDNGKWLVENKDGKVIPISESTADDRQYYGNGIPKYL
LGWNNSFKIKNFDLEVNVRGAFGHDVLNMQRMYYENPVNKAYNALKTSYDPKYGKTLNND
LVYVSDYIEKGDYIKIDNVTLGYTFPDQLIKGIKNLRIYVSALNLFTITKYKGLDPEAVS
YSGDFTFAPGIENRDAYPTTKTFTTGLSVSF
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaaaaaatgagcattatcatggctctggcaagagaatttggattcttttgctt
ttcctccttccctgtcaactgtatgctcaaaatacaattacagtaaaaggaactgtatca
gacgtaaaagatggaaccacattagttggggtttctattaaagagaaaggtacttcaaat
gtggtcagcacagatactaaaggcggttatagcctgaaagtaaaaaatgccgctgcagta
cttgtgttttcttacattggttatcaatcgcaggagattgctttaaatggcagagcaagc
ctgaacgccatgctcagtgtagaaagtaccggactggatgaagtagtggtggttggttat
ggcacccagaaaagaggtgaggtaacaagttctattgcgactgtaaaggcagaagatttt
accaaaggaacggtaagagatgccggtcagctgatccaggggaaagtggcaggattaagg
atcactacaccatccggagatcctgcaggcagtacacaaattaacctgagaggtctgaac
tctattaacggtacatcagagccgctgattttgattgatggaattccaggctcacttaat
actgttgcaccagaagatattgaagcgatagatgtcttaaaagatggctcagctgcagcg
atttatggaaccagagcaaccggcggagtaattttaatcaccaccagaaagaaccccacc
ggatctaagtcgactattgaatataccaactatgcaaacattcaaaagattgctaaaaag
ccggaaatgctcacggctgacgattatcgccgtttaaatagtcagggtgctaaatataca
gactatggaggcagtacaaactggctggatgagatcctgcaaaacccggtgagtcaaaat
cataatctgagtatttttggtggtaattctacgaccaattttagcggttctgtaaactat
cgtgactgggaaggtatatttctgcgcacaggacaaaaacgcttaacagtacgcgcagca
ttgaaccattctatgtttgacgataagctgaaaaccaatattacagtaattaaccgcagc
attacttcttcgcaaggcggagcagatggttatgcttatcgccaggccattatccgcaat
ccgactgatcatatctataatgacaatggaaaatggcaggaaagggatatttatttttac
gataatcccttgtccaggattaatgaggcaactaatgatgcaaggctaagacaaaccagg
atcagcggaagtctggattacaggcctgttaaagatctgagcttgaaattactggcttct
aatattcaaaataataatctatatggaaacagcactacatttgaacatgtaaatacgacc
aaatcaaaattaaatggcacggcttcccgttcaacagattccggaaatgaaaacctcgtg
gaatttacggccaattataccaaaagtataggtctccataattttagtgtacttggcgga
tatagctggcaggatgcggttagcgaaaatttttacgcttataacttcgattttccaaca
gatgcctatagttataataacctgcaaaccggagctggacttaaagcaggcaaagccgat
atgaccagtgataaaagtaaatggcagctggccggtttttttagccggttaacctataac
tggaatgaaaaatatttgtttatggcgagtataagaagagaagggtcctctaaatttggg
gccaattatcactggggctcgtttccagcggcttcagtgggctggcgtgtaactaaggaa
gattttatgcagcatattcctgaaatttcagatttgaagttaagggctggctatggtgta
acgggtacaattgccaataatccttatcaatcacaaaccagttacaaatatgattatgga
gagggtgcttttattgatggtaaatgggtaccgggatttgttcctgcaagaaatttcaat
cctgacctgagatgggaaaagaaaaaagaatacaatgcaggtctggactttggtttattt
aaaaacaggattacagggtcattagactattatagccggacagtagaagacctgatctat
aattttagtgtaccaatgcctccttatctcactaatagtatgctgattaatgccggcacc
atgaaaaattcaggtttcgaagcgctgatcaatgtaaaagcgatagacagtaaactttta
aaatggaattcaagcattacctattctaccaataagaacaaacttgtcaatttgtccaat
gacaaatttgatgtaactgtaggatttttcgatgccggttatactggtgagcctatacaa
actaatacgcatcgtgtaagagttgggggccctatcggacagtttttcgtacttaagagt
gttggggtagatgacaatggaaagtggctggtagaaaataaggatggcaaagtcattcca
atttctgagtctactgcagatgaccgtcagtattatgggaatggaatccctaaatatctg
ttgggatggaacaactcttttaagatcaaaaattttgatctggaggttaatgtcagaggt
gcttttggtcatgatgtattgaatatgcaacgaatgtattatgagaacccagtcaacaaa
gcatacaatgccttgaaaacgtcttacgaccctaaatatggaaaaacgctgaacaacgac
ctggtttatgtaagcgactatattgaaaagggagattatatcaaaattgataacgttaca
ctgggttacacttttccagaccaactgattaaaggcatcaaaaacctcagaatatatgtt
tctgcattgaatctgtttacaataaccaaatataaagggctggatccagaagctgtgagc
tactccggagattttacttttgctcctggtattgaaaacagagatgcttatcctaccaca
aaaacatttaccacaggcctcagtgtctctttttaa
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