KEGG   Pedobacter cryoconitis: AY601_2800
Entry
AY601_2800        CDS       T04341                                 
Name
(GenBank) Collagen-binding protein
  KO
K21573  TonB-dependent starch-binding outer membrane protein SusC
Organism
pcm  Pedobacter cryoconitis
Brite
KEGG Orthology (KO) [BR:pcm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pcm02000]
    AY601_2800
Transporters [BR:pcm02000]
 Other transporters
  Pores ion channels [TC:1]
   AY601_2800
SSDB
Motif
Pfam: Plug TonB_dep_Rec CarbopepD_reg_2 SopD DUF3005 MetallophosN
Other DBs
NCBI-ProteinID: AMP99682
UniProt: A0A127VEB6
LinkDB
Position
complement(3333420..3336395)
AA seq 991 aa
MKAKNEHYHGSGKRIWILLLFLLPCQLYAQNTITVKGTVSDVKDGTTLVGVSIKEKGTSN
VVSTDTKGGYSLKVKNAAAVLVFSYIGYQSQEIALNGRASLNAMLSVESTGLDEVVVVGY
GTQKRGEVTSSIATVKAEDFTKGTVRDAGQLIQGKVAGLRITTPSGDPAGSTQINLRGLN
SINGTSEPLILIDGIPGSLNTVAPEDIEAIDVLKDGSAAAIYGTRATGGVILITTRKNPT
GSKSTIEYTNYANIQKIAKKPEMLTADDYRRLNSQGAKYTDYGGSTNWLDEILQNPVSQN
HNLSIFGGNSTTNFSGSVNYRDWEGIFLRTGQKRLTVRAALNHSMFDDKLKTNITVINRS
ITSSQGGADGYAYRQAIIRNPTDHIYNDNGKWQERDIYFYDNPLSRINEATNDARLRQTR
ISGSLDYRPVKDLSLKLLASNIQNNNLYGNSTTFEHVNTTKSKLNGTASRSTDSGNENLV
EFTANYTKSIGLHNFSVLGGYSWQDAVSENFYAYNFDFPTDAYSYNNLQTGAGLKAGKAD
MTSDKSKWQLAGFFSRLTYNWNEKYLFMASIRREGSSKFGANYHWGSFPAASVGWRVTKE
DFMQHIPEISDLKLRAGYGVTGTIANNPYQSQTSYKYDYGEGAFIDGKWVPGFVPARNFN
PDLRWEKKKEYNAGLDFGLFKNRITGSLDYYSRTVEDLIYNFSVPMPPYLTNSMLINAGT
MKNSGFEALINVKAIDSKLLKWNSSITYSTNKNKLVNLSNDKFDVTVGFFDAGYTGEPIQ
TNTHRVRVGGPIGQFFVLKSVGVDDNGKWLVENKDGKVIPISESTADDRQYYGNGIPKYL
LGWNNSFKIKNFDLEVNVRGAFGHDVLNMQRMYYENPVNKAYNALKTSYDPKYGKTLNND
LVYVSDYIEKGDYIKIDNVTLGYTFPDQLIKGIKNLRIYVSALNLFTITKYKGLDPEAVS
YSGDFTFAPGIENRDAYPTTKTFTTGLSVSF
NT seq 2976 nt   +upstreamnt  +downstreamnt
atgaaagcaaaaaatgagcattatcatggctctggcaagagaatttggattcttttgctt
ttcctccttccctgtcaactgtatgctcaaaatacaattacagtaaaaggaactgtatca
gacgtaaaagatggaaccacattagttggggtttctattaaagagaaaggtacttcaaat
gtggtcagcacagatactaaaggcggttatagcctgaaagtaaaaaatgccgctgcagta
cttgtgttttcttacattggttatcaatcgcaggagattgctttaaatggcagagcaagc
ctgaacgccatgctcagtgtagaaagtaccggactggatgaagtagtggtggttggttat
ggcacccagaaaagaggtgaggtaacaagttctattgcgactgtaaaggcagaagatttt
accaaaggaacggtaagagatgccggtcagctgatccaggggaaagtggcaggattaagg
atcactacaccatccggagatcctgcaggcagtacacaaattaacctgagaggtctgaac
tctattaacggtacatcagagccgctgattttgattgatggaattccaggctcacttaat
actgttgcaccagaagatattgaagcgatagatgtcttaaaagatggctcagctgcagcg
atttatggaaccagagcaaccggcggagtaattttaatcaccaccagaaagaaccccacc
ggatctaagtcgactattgaatataccaactatgcaaacattcaaaagattgctaaaaag
ccggaaatgctcacggctgacgattatcgccgtttaaatagtcagggtgctaaatataca
gactatggaggcagtacaaactggctggatgagatcctgcaaaacccggtgagtcaaaat
cataatctgagtatttttggtggtaattctacgaccaattttagcggttctgtaaactat
cgtgactgggaaggtatatttctgcgcacaggacaaaaacgcttaacagtacgcgcagca
ttgaaccattctatgtttgacgataagctgaaaaccaatattacagtaattaaccgcagc
attacttcttcgcaaggcggagcagatggttatgcttatcgccaggccattatccgcaat
ccgactgatcatatctataatgacaatggaaaatggcaggaaagggatatttatttttac
gataatcccttgtccaggattaatgaggcaactaatgatgcaaggctaagacaaaccagg
atcagcggaagtctggattacaggcctgttaaagatctgagcttgaaattactggcttct
aatattcaaaataataatctatatggaaacagcactacatttgaacatgtaaatacgacc
aaatcaaaattaaatggcacggcttcccgttcaacagattccggaaatgaaaacctcgtg
gaatttacggccaattataccaaaagtataggtctccataattttagtgtacttggcgga
tatagctggcaggatgcggttagcgaaaatttttacgcttataacttcgattttccaaca
gatgcctatagttataataacctgcaaaccggagctggacttaaagcaggcaaagccgat
atgaccagtgataaaagtaaatggcagctggccggtttttttagccggttaacctataac
tggaatgaaaaatatttgtttatggcgagtataagaagagaagggtcctctaaatttggg
gccaattatcactggggctcgtttccagcggcttcagtgggctggcgtgtaactaaggaa
gattttatgcagcatattcctgaaatttcagatttgaagttaagggctggctatggtgta
acgggtacaattgccaataatccttatcaatcacaaaccagttacaaatatgattatgga
gagggtgcttttattgatggtaaatgggtaccgggatttgttcctgcaagaaatttcaat
cctgacctgagatgggaaaagaaaaaagaatacaatgcaggtctggactttggtttattt
aaaaacaggattacagggtcattagactattatagccggacagtagaagacctgatctat
aattttagtgtaccaatgcctccttatctcactaatagtatgctgattaatgccggcacc
atgaaaaattcaggtttcgaagcgctgatcaatgtaaaagcgatagacagtaaactttta
aaatggaattcaagcattacctattctaccaataagaacaaacttgtcaatttgtccaat
gacaaatttgatgtaactgtaggatttttcgatgccggttatactggtgagcctatacaa
actaatacgcatcgtgtaagagttgggggccctatcggacagtttttcgtacttaagagt
gttggggtagatgacaatggaaagtggctggtagaaaataaggatggcaaagtcattcca
atttctgagtctactgcagatgaccgtcagtattatgggaatggaatccctaaatatctg
ttgggatggaacaactcttttaagatcaaaaattttgatctggaggttaatgtcagaggt
gcttttggtcatgatgtattgaatatgcaacgaatgtattatgagaacccagtcaacaaa
gcatacaatgccttgaaaacgtcttacgaccctaaatatggaaaaacgctgaacaacgac
ctggtttatgtaagcgactatattgaaaagggagattatatcaaaattgataacgttaca
ctgggttacacttttccagaccaactgattaaaggcatcaaaaacctcagaatatatgtt
tctgcattgaatctgtttacaataaccaaatataaagggctggatccagaagctgtgagc
tactccggagattttacttttgctcctggtattgaaaacagagatgcttatcctaccaca
aaaacatttaccacaggcctcagtgtctctttttaa

DBGET integrated database retrieval system