KEGG   Pedobacter cryoconitis: AY601_2814
Entry
AY601_2814        CDS       T04341                                 
Name
(GenBank) hypothetical protein
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pcm  Pedobacter cryoconitis
Pathway
pcm02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pcm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AY601_2814
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcm03021]
    AY601_2814
Transcription machinery [BR:pcm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AY601_2814
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF GerE HTH_Mga HTH_SpdB_C UPF0122 HTH_16 HTH_24 GIY_YIG_domain HTH_28
Other DBs
NCBI-ProteinID: AMP99696
UniProt: A0A127VEB5
LinkDB
Position
complement(3358847..3359425)
AA seq 192 aa
MDYGIADLNDESLLLMLKSGDQLAFSEIYQRYWPILYRHAFRMLKSDAESEDVVQDIFIK
FWKTAPNLPDHTTLGAYLYTMVRNTVLNIIAKSSVHASYRSDLERFMVDGYELSDHLVRE
KILAKLIEQEIQQLPSRMREVFERKRIDHLSYKEIAEAMNISELTVKTQMNKAITILRRK
LGNHIALFFTLL
NT seq 579 nt   +upstreamnt  +downstreamnt
atggactatgggattgctgatttgaatgatgaatcgttgcttttgatgctcaaaagtggt
gatcagttggctttttccgaaatatatcagcgttattggcctattttgtaccgccatgcg
tttagaatgcttaaatcagatgctgaatctgaggatgttgttcaggatatatttataaaa
ttctggaagactgcccctaatcttcctgaccatacaactcttggtgcttatctgtacacc
atggtacgaaacaccgtactcaatattattgcaaagagtagcgtacatgcttcctaccgg
agtgatctggaaagatttatggtggatggatatgaactttcggatcacctggtccgggaa
aagatccttgctaaattgatagaacaggaaatacagcaactgccatccagaatgagggaa
gtttttgaaagaaaacggattgatcatctatcctataaagagattgctgaggcgatgaat
atttctgaactcactgtaaagacacaaatgaacaaagctatcaccattctccgcagaaaa
ctggggaaccatattgcccttttctttaccttattataa

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