Pedobacter cryoconitis: AY601_2814
Help
Entry
AY601_2814 CDS
T04341
Name
(GenBank) hypothetical protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AY601_2814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcm03021
]
AY601_2814
Transcription machinery [BR:
pcm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AY601_2814
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
GerE
HTH_Mga
HTH_SpdB_C
UPF0122
HTH_16
HTH_24
GIY_YIG_domain
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AMP99696
UniProt:
A0A127VEB5
LinkDB
All DBs
Position
complement(3358847..3359425)
Genome browser
AA seq
192 aa
AA seq
DB search
MDYGIADLNDESLLLMLKSGDQLAFSEIYQRYWPILYRHAFRMLKSDAESEDVVQDIFIK
FWKTAPNLPDHTTLGAYLYTMVRNTVLNIIAKSSVHASYRSDLERFMVDGYELSDHLVRE
KILAKLIEQEIQQLPSRMREVFERKRIDHLSYKEIAEAMNISELTVKTQMNKAITILRRK
LGNHIALFFTLL
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atggactatgggattgctgatttgaatgatgaatcgttgcttttgatgctcaaaagtggt
gatcagttggctttttccgaaatatatcagcgttattggcctattttgtaccgccatgcg
tttagaatgcttaaatcagatgctgaatctgaggatgttgttcaggatatatttataaaa
ttctggaagactgcccctaatcttcctgaccatacaactcttggtgcttatctgtacacc
atggtacgaaacaccgtactcaatattattgcaaagagtagcgtacatgcttcctaccgg
agtgatctggaaagatttatggtggatggatatgaactttcggatcacctggtccgggaa
aagatccttgctaaattgatagaacaggaaatacagcaactgccatccagaatgagggaa
gtttttgaaagaaaacggattgatcatctatcctataaagagattgctgaggcgatgaat
atttctgaactcactgtaaagacacaaatgaacaaagctatcaccattctccgcagaaaa
ctggggaaccatattgcccttttctttaccttattataa
DBGET
integrated database retrieval system