Pedobacter cryoconitis: AY601_3074
Help
Entry
AY601_3074 CDS
T04341
Name
(GenBank) Hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm00280
Valine, leucine and isoleucine degradation
pcm00650
Butanoate metabolism
pcm00907
Pinene, camphor and geraniol degradation
pcm01100
Metabolic pathways
pcm01120
Microbial metabolism in diverse environments
pcm04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
AY601_3074
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AY601_3074
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AY601_3074
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AY601_3074
Enzymes [BR:
pcm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
AY601_3074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
HEAT_DAAF5
Motif
Other DBs
NCBI-ProteinID:
AMP99947
UniProt:
A0A127VFH5
LinkDB
All DBs
Position
3693301..3694167
Genome browser
AA seq
288 aa
AA seq
DB search
MSQKAIKLIECPRDAMQGIHDFIPTDLKAAYINLLLQVGFDTIDFGSFVSPKAIPQLTDT
KEVLAQLDLSNTSSKLLAIVANLRGAENAMLFPEIDYVGFPFSISETFQQRNTNSTIQES
LVTVEKMLELCDKNQKTAVVYLSMGFGNPYGDAYNTAIVEQWASELVKRGTKILSLSDTT
GVSTPEKIKELMQLLLRSFPETEIGLHLHSTPETRKEKIEAAYHIGCRRFDSALKGFGGC
PMAADDLTGNLATEELITYLQQQGETLKLNLDKWQEAMLLSSKVFQGM
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagaaagctattaaactaatcgaatgtccgagagatgccatgcaaggcatccat
gactttattcccacagacttaaaagcggcctatatcaatttgctcctgcaagttggtttt
gataccatagatttcggcagttttgtttcgccaaaggctatcccccagcttaccgatacc
aaagaagttttagcacaactggatctgagcaatacatccagcaaattattagctattgta
gccaatctgcgtggcgctgaaaatgccatgctctttcctgaaatcgattacgtaggattt
ccattttctatctctgaaacttttcagcagaggaatacaaattccactattcaggaatct
ctggtaaccgtagaaaagatgctggaattatgtgataaaaatcagaagactgccgtagtt
tacttatctatgggctttggtaatccatatggagatgcttacaacacagcaattgtagaa
caatgggcatcggaattggtaaaaagggggactaaaatactttccttatcagataccaca
ggagtttctacaccagaaaagattaaagagttaatgcagctgctgctccgcagctttccg
gaaacagaaataggcctgcatttgcacagcactccggagacgcgtaaagaaaaaattgaa
gctgcttaccacattgggtgcagacgttttgatagtgctttaaaaggctttggaggttgt
ccgatggcagccgatgacctgactggtaacctggcgaccgaagaactgattacttatctt
cagcaacaaggcgaaacattgaagctgaacttagataaatggcaggaggcgatgttgttg
tcatcgaaagtatttcaaggaatgtaa
DBGET
integrated database retrieval system