Pedobacter cryoconitis: AY601_3098
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Entry
AY601_3098 CDS
T04341
Name
(GenBank) ABC transporter
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AY601_3098
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcm02000
]
AY601_3098
Transporters [BR:
pcm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
AY601_3098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
nSTAND3
AAA_22
DUF87
RsgA_GTPase
AAA_29
MMR_HSR1
AAA_23
NB-ARC
AAA_16
FtsK_SpoIIIE
AAA
SH
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AMP99971
UniProt:
A0A127VFE9
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All DBs
Position
3713462..3715252
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AA seq
596 aa
AA seq
DB search
MKHLRFLNKHFYKYKWWIVPGVFFVIISNIFGVIPAQVIGHAFNLITENIQIYGLFTGFE
RQQIIYDIFSYSLLYFGSIVLILYLIRGLFLFFMRQTLILMSRHIEFDMKNEIYAHYQKL
SLGFYRRNNTGDLMNRATEDVNRVRMYVGPAIMYAINTLVLFLLIITSMYSVNAKLATFC
LLPLPVLVIIIYFVNTQINNKSEQIQEQLSSLSSFVQERFSGIRVIKSYVREDYTREIFA
NESSAYKNSSMGLVRVQALFYPTMLLLVGLSTILTVYIGGEQVIDGSITAGNIAEFIVYV
NQLTFPVTMLGWVTTLIQRASASQKRINEFLELQSDIHTGDDPAREVSGNIKFEHVNFTY
QDTGIKALQDVSFDIKAGQFVAIIGRTGSGKSTLANLMMRMYDTDSGQISIDGNPLKNVN
LNSFRDQVGFVPQEVFLFSDNIKNNIAFGLDEVTDLEIENAARNAAVYHNIMDFELKFDT
MLGERGITLSGGQKQRVSIARALIKEPKILIFDDCLSAVDTKTEEEILNNLGNVMKGKTS
ILIAHRISTIKKADKILVLEEGRIAEQGTHDELINLHGIYEEMYQNQLLEEENKSL
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaccttcgttttttaaataaacatttctataaatataaatggtggatcgtaccc
ggggtgtttttcgttattatctctaatattttcggtgtaattccagctcaggttataggc
catgcctttaaccttattacggagaacatccagatttatggccttttcaccggtttcgaa
agacagcagatcatttatgacatcttcagctacagtctgctatatttcggctcgatcgta
ttgatcctctatctgatcagaggtttattcctgttctttatgcgccagaccctgatcctg
atgtccagacatattgaatttgacatgaaaaatgagatttacgcgcactaccaaaagctg
agtctgggcttttaccgccgcaacaataccggtgatctaatgaacagggctaccgaagat
gtcaacagagtaagaatgtatgttggccctgcaattatgtatgccatcaatacccttgtt
ttatttctgctgattattacttccatgtattcagtgaatgctaaactggctaccttctgt
ttgctacctctgccggtactggtcatcattatctactttgtcaacacccagatcaacaat
aaaagcgagcagattcaggaacaactttccagtttatcaagttttgtacaggaaagattt
tcaggcatcagggtgatcaaatcttatgtcagagaagattatacacgggagattttcgct
aacgaaagcagcgcctataaaaacagctctatgggcctggtacgcgtacaagcactcttt
tacccgactatgcttcttttggttggcctgagtactattcttaccgtatatataggtgga
gaacaagtaatcgacgggtctattactgcagggaacattgcagaattcatcgtgtatgtg
aatcagcttacattcccggtcaccatgctgggctgggtaaccacactaattcagcgcgcg
tcagcctcacagaaaaggatcaatgaatttcttgaattacaatcagatatccataccgga
gacgaccctgccagagaagtcagcggaaatatcaaattcgagcacgttaactttacctat
caggatacagggatcaaagcattgcaagatgtaagttttgatattaaagctggacaattc
gttgcgatcatcgggcgtaccggatcaggaaaatctaccctggccaatctgatgatgaga
atgtatgataccgattcaggtcagatttcaattgacgggaatccactgaagaatgtcaac
ctgaattctttcagagatcaagtcggtttcgttccacaagaagtttttctcttttctgat
aacattaagaataatattgcctttggactggatgaggtaactgatctggagatcgaaaat
gcagcacgaaatgcagccgtatatcataatataatggattttgagctgaagtttgacacg
atgctgggtgagcgtggaatcacactttccggcggacaaaaacaacgtgtatctatcgca
agagcattgatcaaagagcctaaaatattaatttttgacgattgtctttccgcagtagat
accaaaactgaggaagaaatcttaaacaacctgggtaatgtcatgaaaggaaagaccagc
atattaattgcccacaggatatctactatcaaaaaagcagacaagattctggtacttgaa
gaaggccgtatcgcagaacaaggtactcatgatgaactaattaaccttcacggcatttac
gaagagatgtatcagaaccagttattggaagaagaaaataaatctctttaa
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