Pedobacter cryoconitis: AY601_3178
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Entry
AY601_3178 CDS
T04341
Name
(GenBank) Coproporphyrinogen-III oxidase
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm00860
Porphyrin metabolism
pcm01100
Metabolic pathways
pcm01110
Biosynthesis of secondary metabolites
pcm01240
Biosynthesis of cofactors
Module
pcm_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
AY601_3178
Enzymes [BR:
pcm01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
AY601_3178
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GFIT
Motif
Pfam:
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
AMQ00049
UniProt:
A0A127VGL4
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Position
complement(3788292..3789656)
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AA seq
454 aa
AA seq
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MSIKTLIAKYHVAAPRYTSYPTVPYWDTEGFDQEKWAYAVRKSFTHSNQQEGISVYIHLP
FCESLCTYCGCNTRITRNHKVEHPYIETVLKEWKLYQKLFDSKPVIRELHLGGGTPTFFS
PENLKLLIDGILSMAVIHEDAEFSFEAHPGNTTQAHLDTLYQLGFGRLSLGIQDFDPKVQ
LAINRIQSVAEVSLVTQQARAAGYHSINYDLIYGLPLQNIDGLSDTISSVLTLRPDRIAF
YSYAHVPWVRPGQRRYTELDLPSPALKQELYELGREMLKAGGYVEIGMDHFTLATDSLYQ
AEKEGKLHRNFMGYTHQYSKLMIGLGVSSISDSWTAFAQNVKKVEDYMSLVNEGKIPVFK
GHILDQEDLVIRRHILNLMCKGETSWAKPEQQSEGFSKGLERMMLIADDGLVMIKGTELK
VTVLGKRFLRNICMALDSRLYANQPQTQLFSMAG
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaaaacattgattgcaaaataccatgttgctgcaccccgttacaccagttat
cccacagtcccttactgggataccgaagggtttgatcaggagaaatgggcttatgcagta
cgcaagtcattcacacacagcaatcagcaggaggggatcagcgtatatatccaccttcct
ttttgcgaaagtctttgtacttattgtggttgtaatacacgtattacaagaaatcacaag
gtggaacatccttatattgaaaccgtcttaaaggaatggaaattataccagaaactattc
gatagtaaacctgtgatcagagagctgcatttgggagggggtacaccaacatttttcagt
cccgaaaacctgaagctactgatagatggaattctgagtatggcggttatccatgaagat
gcagagtttagctttgaagcgcacccaggcaacacaacccaggcgcatttagatacactg
tatcaattaggttttggacgtctgagcttaggtatccaggattttgatcctaaagtacag
ctcgctattaacaggatacaaagcgttgcagaggtctctttagttacgcagcaagccaga
gcagcaggttaccattctatcaactacgatttgatttatggccttcctttgcagaatatt
gatggcttatctgatactatttcttcagtattaaccttgcgtccagacaggatagccttt
tatagttatgcacatgtaccctgggtgagaccgggacaacgcaggtatacagaattggat
cttccttcgcctgcattaaagcaggaattatatgaattggggcgcgaaatgctaaaagca
ggaggatatgtggagatcggaatggatcactttacccttgcgaccgatagcctgtatcaa
gctgaaaaagaaggtaagttacaccgtaattttatgggttacactcatcagtatagtaaa
ctgatgatcggattaggcgtctcttctatcagtgatagctggactgcttttgcgcagaat
gtgaaaaaggtagaagattatatgagcttggttaacgaagggaaaatacctgtttttaaa
ggccatatcctggatcaggaagatttggtaatcagaaggcatatcttaaacctgatgtgt
aaaggagagacctcatgggctaaacctgaacaacaaagtgaaggtttcagcaaaggcctg
gaaaggatgatgttaattgcagatgatggcctggtgatgatcaaaggcacagaattaaag
gtaaccgtattgggtaaaaggttcttaagaaatatctgtatggcgcttgattccagactt
tacgccaaccaaccgcaaactcaattatttagtatggctggataa
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