Pedobacter cryoconitis: AY601_3249
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Entry
AY601_3249 CDS
T04341
Name
(GenBank) Valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AY601_3249
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcm01007
]
AY601_3249
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcm03016
]
AY601_3249
Enzymes [BR:
pcm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
AY601_3249
Amino acid related enzymes [BR:
pcm01007
]
Aminoacyl-tRNA synthetase
Class I (U)
AY601_3249
Transfer RNA biogenesis [BR:
pcm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AY601_3249
Prokaryotic type
AY601_3249
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
DUF3144
Motif
Other DBs
NCBI-ProteinID:
AMQ00120
UniProt:
A0A127VFR4
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All DBs
Position
complement(3866269..3868941)
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AA seq
890 aa
AA seq
DB search
MSISTKYDPAETEDKWYSYWLSKKFFHSEPDEREPYTIVIPPPNVTGVLHMGHMLNNTIQ
DVMIRRARMQGKNACWVPGTDHASIATEAKVVAMLKERGISKKDLTREEFMAYAWEWKEK
YGGIILDQLKKLGASCDWDRTRFTMEDDLSESVIDCFIDLYKKGKIYRGVRMVNWDPAGK
TAVSDEEVIRKEVNQKLYYIKYSIAPATGSDTEFLTIATTRPETIMADAAICINPNDERY
THLKGKKVFVPLINREIPIIEDEYVTMDFGTGCLKVTPAHDLNDYELGVKHKLPVIDILN
DDGTLNELAVILVGEDRFIARKKIAVLLDEAGHLEKVEEYKSQVGFSERTDAAIEPKLSL
QWFCKMDEMAKPALADVLNGDVKLIPEKFVNTYRHWMENVRDWNISRQLWWGQRIPAWFD
DKGDWVVARTKEDALNEFLKLKDIDGKFTEEEANGFKHQLADFIRQDDDVLDTWFSSWLW
PISVFNGLKDPGNKDINYYYPTNDLVTAPEILFFWVARMIMAGHEFMGKKPFTNVYLTGI
VRDKLGRKMSKSLGNSPDPIGLIEKYGADGVRVGMLLCSPAGNDLMFDESYCEQGRNFAN
KIWNAFRLVKGWEVDETLANPNTQAILWFENRFNEALAEIEDNYKQYRLSEALMTTYKLV
WDDFCAWYLEMVKPVYQHPIDPVSLKATIGFFEKILTLLHPFMPFITEELWHDELFGTKG
EMDCIIVAPYPVVGAADLSLLKDVEVVKGIVAEVRNIRNTKQISPKEGLPLSVKVNSSLA
YDKWLTIISKLANITEVDFVSDKVAGAAGFMVGNDEFFIQLNETIDVDAERERLNGELVY
LQGFLKSVDAKLSNERFVQNAKPEIIQNERNKKADAEAKVKIIQESLLSL
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgagcatttctactaaatacgatcccgccgaaaccgaagacaagtggtacagctactgg
ctgtcaaaaaagttctttcattctgaaccagatgaacgtgaaccctatacaattgtaatt
cctccaccaaacgtcactggggtattacatatgggccacatgctcaacaatacaattcag
gatgtcatgattcgccgcgcacgtatgcaaggtaaaaatgcatgctgggttcctggaact
gaccatgcttctattgctactgaagcaaaggtggttgccatgttgaaagagagagggatc
agtaaaaaagatctgaccagagaagaattcatggcctacgcgtgggagtggaaagaaaaa
tacggtggtattattctggatcagctgaagaaactgggtgcaagctgcgactgggaccgg
acgcgtttcacaatggaagatgatctttcagaatctgtaatcgattgttttattgacctg
tataaaaaagggaaaatttaccgtggtgtccgtatggtcaactgggatccggctggtaaa
actgccgtttctgatgaagaagtaatccgtaaggaagtaaatcagaagttgtattatatt
aaatattctatcgctcctgctacaggttccgacactgaatttttaacgattgcaactaca
cgtcctgaaacgattatggctgatgcagcaatctgtatcaatcctaatgatgagcgttat
acgcatcttaaaggtaaaaaagtatttgttcctttaatcaaccgtgagattccgattatt
gaggatgaatatgtaacaatggattttggtactggctgtttaaaggtaacacctgcgcat
gatctgaatgattatgaactgggtgtgaaacataaacttccggtaatcgatatcttaaat
gatgatggtactttaaatgaacttgctgttattctggtaggcgaagaccgttttattgcc
cgtaaaaagattgcagtattactggacgaagccggtcatctggagaaagtagaagaatat
aaatcgcaggttgggttttctgaacgtactgatgctgcaattgagcctaaactttcttta
caatggttctgtaaaatggacgaaatggctaaaccagctttagctgatgtactgaatggt
gacgtgaagcttattcctgagaaattcgtgaatacttaccgccattggatggagaacgta
agggattggaatatcagccgccaattgtggtgggggcaacgtattcctgcctggttcgat
gataaaggagattgggtagttgcgagaactaaagaagatgctttaaatgagtttttaaag
cttaaagatattgatggcaagtttactgaagaagaagcgaatggatttaaacaccagtta
gctgattttatcagacaagatgatgatgtattagatacctggttttcttcatggttatgg
ccgatttcggtgttcaatggattgaaagatccgggaaataaagatattaattattattat
cctacgaatgatctggttactgcccctgaaattttattcttctgggtagcacgtatgatt
atggctggtcatgaatttatgggtaaaaagccatttactaatgtttacctgactggtatt
gtacgtgataagttaggccgtaaaatgtctaaatctttgggcaattctcctgatccgatt
ggtttaattgagaagtatggtgcagatggggttagagtagggatgttattatgttctcct
gctggtaatgacttgatgttcgatgaaagttactgcgagcagggaaggaattttgcgaat
aaaatctggaatgctttccgcctggtaaaaggttgggaggttgatgagactttagcgaat
cctaatacgcaggctattttgtggtttgagaatcgtttcaatgaggctttagctgaaatt
gaagataattacaagcagtaccgtttgtcagaggctttaatgactacttacaaattggtg
tgggatgatttctgtgcatggtacctggaaatggtaaaacctgtttatcaacatccgatt
gacccggtttctctgaaagcaacgatcggtttctttgaaaagattctaaccttactgcat
ccgtttatgccgtttatcaccgaagaattatggcatgatgagctatttggcacaaaagga
gagatggattgcattattgtagcgccttatcctgtggttggggctgctgatttatcttta
ttgaaagatgttgaggttgttaaagggattgttgctgaggtacgtaatatccggaataca
aaacagatttctccgaaagagggtttgcctttgagtgtgaaggttaattcttctttagct
tatgataaatggttgactattatttctaaactggcaaatattactgaggtagattttgta
agtgataaggtggcgggtgctgctggtttcatggttggaaatgatgagttttttatacag
ctgaatgagacgattgatgtggatgcagaaagggagagattgaatggagagcttgtgtat
ttgcaagggttcttgaaatctgtagatgcaaagctgagcaatgaaagatttgtacagaat
gcgaagccagagattattcagaatgaaaggaataagaaggctgatgctgaagctaaggtg
aagattattcaagagtctcttctaagtttgtaa
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