Pedobacter cryoconitis: AY601_3562
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Entry
AY601_3562 CDS
T04341
Name
(GenBank) antibiotic ABC transporter ATP-binding protein
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AY601_3562
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcm02000
]
AY601_3562
Transporters [BR:
pcm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
AY601_3562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
RsgA_GTPase
AAA_22
PAH_ZNF598
MMR_HSR1
AAA_30
Cytochrom_B_C
Motif
Other DBs
NCBI-ProteinID:
AMQ00425
UniProt:
A0A127VGF5
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All DBs
Position
complement(4231004..4232773)
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AA seq
589 aa
AA seq
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MSKITGDALNVGLLRRVFQYVKPYRSIFIWSVILTILLALIAPVRPFLIKYTLDNYILKG
EHSGLVMMTMLMLFLLVVQSVIQYSHTLLTNTLGQSAIRDLRINVFNHITKLRLQYFDKT
PIGQLITRTVSDLETISDIFSEGLIVIIGDILQVIAIIAVMFYADWELTVIVLLPMPLLI
MATSVFQKSIKSAFQEIRTEVSNLNTYLQEHITGISIIQYFAREDQEFRKFRKINARYRD
ANIRSNWYYSIFFPVVEIISAMSLGLLVWYGAKSILAKPLDVTPGTIAEFILYISMLFRP
IRELADKFNTLQMGMVGAERVFKVLDTKELTTNNGTYKPEKMAGNIKFDKVWFAYNDENY
VLKNISFEVKAGQTVAMVGATGAGKSSTINILNRFYEIQKGEIKVDGVSINDYELNYLRN
NIATVLQDVFLFSDTIFNNITLNNPAITMDEVVDAAQKVGAHDFIERLPGGYQYNVMERG
ATLSAGQAQLISFIRALVYNPSILVLDEATSSVDTETEMLIQTAIDKLMKGRTSIVIAHR
LSTIQKADQIIVLDKGEIKEIGNHQELLKLDGYYKKLYDLQFHSVGIAK
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaattacaggtgatgcgttaaacgtaggcttattgagaagagtttttcagtac
gttaaaccataccgcagcatatttatctggtcagttattttaacgatactacttgcatta
attgcaccagtaagacctttcctgatcaaatataccctggataattatattctgaaaggg
gagcacagcggcctggtgatgatgaccatgctgatgctctttttactggttgtacaaagt
gtcattcagtacagtcataccttgctgaccaatacgctggggcagtcggccatccgtgat
ctgagaatcaatgtattcaatcatatcactaaactcaggctgcaatactttgataaaacg
ccgataggacaattgataacccgtaccgtttcagatctggaaaccatctctgatattttc
tcagaaggactgattgtgatcatcggtgatattctgcaggtcattgcgattattgctgtt
atgttttatgctgactgggaattaacggtaattgtgcttttacccatgcctcttttgatt
atggcgacttctgtattccagaaatctatcaaatcggctttccaggaaatcaggactgaa
gtatccaatttaaatacctatttgcaagaacatattactggtatttctatcattcaatac
tttgcaagagaagaccaggaattccgtaaattcaggaaaatcaatgcacgttaccgtgat
gcaaacattcgctccaactggtattactccatctttttcccggttgtagaaattatctca
gcaatgtcacttggccttttagtctggtatggtgcaaaaagtattctagccaaacccctt
gatgttacgcctggtacaattgccgagtttatcctctatatcagtatgctgttcaggcca
atccgcgagcttgcggataaattcaacacgcttcaaatgggaatggtaggagcagagcgc
gtatttaaagttttagataccaaagaactgaccacaaacaacgggacttacaagccagag
aaaatggccggtaatattaagtttgataaagtttggtttgcctataacgatgaaaattat
gtcttaaaaaacatctcctttgaggtaaaagcagggcagactgtggcgatggttggcgca
accggtgcaggtaaatcgtctactataaatatcctgaaccgcttttatgagatccagaaa
ggtgagatcaaagttgatggtgtaagtatcaacgactacgaattaaactatttaagaaac
aatatcgctactgtattacaagatgttttcctgttctccgatacgatcttcaataatatt
actttaaataatcctgccatcacgatggatgaagtggttgatgctgctcagaaagtaggt
gcacatgacttcattgaaaggcttccaggaggctatcagtacaatgtgatggagcgcggg
gccacactttctgccggacaagcacagctgatttcgttcatcagggcattggtttataat
ccttctattcttgtgctcgatgaagccacttcatccgtagatacagaaaccgaaatgcta
attcagactgcaattgataaactgatgaaaggccgtacttccatcgtaattgcacaccgt
ttatcaacgatacaaaaagcagatcagattatcgtgcttgataaaggagagattaaagaa
attggtaatcaccaggagttgctgaaacttgatgggtattacaaaaagctgtacgatttg
cagttccactccgttggtatcgctaaataa
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