Pedobacter cryoconitis: AY601_3707
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Entry
AY601_3707 CDS
T04341
Name
(GenBank) Transmembrane rhomboid family protein
KO
K07059
rhomboid family protein
Organism
pcm
Pedobacter cryoconitis
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcm01002
]
AY601_3707
Peptidases and inhibitors [BR:
pcm01002
]
Serine peptidases
Family S54: Rhomboid family
AY601_3707
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GFIT
Motif
Pfam:
Rhomboid
DUF1751
Borrelia_P13
Motif
Other DBs
NCBI-ProteinID:
AMQ00569
UniProt:
A0A127VI15
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Position
complement(4386261..4386998)
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AA seq
245 aa
AA seq
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MNNIHIPPVVKNLLIINVLFFAAKYVFESKGIDLGYYLGAFYFDSPLFKIWQPITYMFMH
GNFTHILFNMFALFSFGSVLETRWGTKRFINFYLITGLGALALQWGVQAFEVYQMTGSPV
NPGAVTIDIVKGMASLNLRGLSPDQGQTLLSIYSGPMVGASGAIFGLLVAFGMLYPNAEL
YIMFIPVPVKAKYIIPVYILIELSLGVASVQGDSVAHYAHLGGALLGFILVKLWKEKNTF
YDYYD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaataatattcatatacctccagttgttaaaaacctgttgatcatcaatgtgttgttt
tttgcggcgaaatatgtttttgaatctaaaggaattgaccttgggtattacctgggcgct
ttttactttgattctccgctgtttaaaatctggcagccaattacgtatatgtttatgcat
gggaactttacccatattttattcaatatgtttgcgctgttctcatttggttctgtactg
gaaaccaggtggggcactaagcggtttatcaatttttacctgatcactggtttgggggca
ctggccttacaatggggtgtgcaggcttttgaagtttatcaaatgacaggttctccggtt
aatccaggggctgtaacgattgatattgtaaagggaatggcttctttgaatttaaggggg
ttaagtcctgaccaggggcaaacgttattaagcatttattctggccctatggttggtgct
tcgggcgctatatttggtttgctggttgcttttggaatgctttacccgaatgccgaactc
tatatcatgtttattcctgtacctgttaaagccaagtatatcattcctgtttatattctg
atagaactgagtttgggagtagcgagtgttcagggagattcagttgcgcattatgcacac
ctgggtggtgcattgctcgggtttatactcgtgaagttatggaaagagaaaaatacattt
tacgattattatgactaa
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