Pedobacter cryoconitis: AY601_3797
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Entry
AY601_3797 CDS
T04341
Name
(GenBank) Peptidase
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
pcm
Pedobacter cryoconitis
Pathway
pcm00550
Peptidoglycan biosynthesis
pcm01100
Metabolic pathways
pcm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AY601_3797
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AY601_3797
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pcm01003
]
AY601_3797
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcm01011
]
AY601_3797
Enzymes [BR:
pcm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
AY601_3797
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AY601_3797
Glycosyltransferases [BR:
pcm01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
AY601_3797
Peptidoglycan biosynthesis and degradation proteins [BR:
pcm01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
AY601_3797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
DUF4017
Motif
Other DBs
NCBI-ProteinID:
AMQ00657
UniProt:
A0A127VH44
LinkDB
All DBs
Position
4495153..4497378
Genome browser
AA seq
741 aa
AA seq
DB search
MTKNISAAEIKSYNITLWKLLIGAMILFAIFIVAIGFGLFGTLPSFRDIEHPKSNQATEI
LTEDKRVLGTYFVQNRSNVTYPEISPNVINALISTEDTRFKEHSGIDFKRTFTIIFYNLV
GKKQGASTITQQLALNLFSEEGRQKNFFKRLMQKFQEWIVAVKLERNFTKEEIITMYLNT
VDFGNQAYGIKSAARVYFNTTPDQLTVAQAATLVGLQKGITRYSPTRNPERSLARRNTVM
SNMVKEDLLTQQQYDEEKAKPLALKFSAATVNDGIAPYFRAVLKNDIKKIFQERSILKAD
GTPYDLDRDGLKIITTINYDMQVYAEEAQKDAMRVLQAQFTKGWKGRNPFKDKELQIEQG
IKRSDRYKALQLEGKSESEIKADFNTPAEMSIFTWKGNLDTLMKPIDSVKYYKLLLRNAM
MAMDPKTGYVKAWVGGINYEHFKYDQVKMGTRQVGSTAKPFTYSVAIENGYSPCYQVLNE
PVTIEVPGSAPWTPKSGGTLPGYITLQKALAFSQNYIAAYLMKQVGPTAVATLAKRMGIT
SNVPAYPSIALGSFDASVFDMVGAYSVFANKGVWTQPTYILRIEDKNGVVLFSQTPQKHP
AMNEDVAYVMTRMLEGVVKNGYGYGLIGKYGLKNPIGGKTGTTQNNSDGWFVGITPDLVA
GVWTGCEDRAFHFINTREGEGSKTAMPIFGGFFKKVYANPKLKISKGDFEVPKSGVSITY
DCNQYQQQQTDTTELDKKLGF
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaaatatttcggctgcagagataaaaagctataacattacgctctggaagtta
ctgataggtgccatgatcctgtttgcaatctttattgttgcaatcggttttgggctattt
ggtaccctgccatccttcagagatattgaacaccctaaaagcaatcaggctactgaaata
ttaactgaagacaaaagggtattaggtacctattttgtacaaaaccgctctaatgtaact
taccctgagatctctccaaatgtaatcaatgccctgatctctacagaagacaccaggttt
aaagaacattcagggattgactttaaacgtacattcaccattatcttctacaatttagtg
ggtaaaaaacaaggggcaagtaccatcactcagcagctggctcttaaccttttctcagaa
gaaggccgtcaaaagaacttcttcaaacgtttaatgcaaaaattccaggaatggattgtt
gcggtaaaactggaacgtaactttaccaaagaagaaattattaccatgtacctgaatacc
gtagattttggtaaccaggcttatggaattaaatctgcagcaagagtttatttcaataca
acgccagatcagcttaccgttgcacaagctgcaacattggttggactgcaaaaaggaatt
acccgctactctcctacccgtaacccggaaagatcattagccagacgaaatacagtcatg
tcaaatatggtcaaagaagatttgctgacccaacaacaatatgacgaagaaaaagcaaaa
ccattagctcttaagttcagtgcagcaactgtaaatgatggaattgctccatatttcaga
gcagtgctgaaaaatgatattaagaaaatcttccaggaacgttctatcttaaaagcagat
ggtacaccatacgatctggacagagatggcctgaagattatcacgaccatcaattacgac
atgcaggtttatgccgaagaagcgcaaaaagatgccatgcgggtattacaagcccaattt
acaaaaggctggaaaggcagaaacccattcaaggataaagaactgcaaattgagcagggt
attaaaagatctgaccgttataaagctttgcagctggaaggaaaatcagaatcagaaatt
aaagcagatttcaataccccggccgaaatgagcatttttacgtggaaaggaaatctggat
acgctgatgaagcctatagattctgtaaaatattataaattattgttaagaaatgccatg
atggcgatggatccgaaaaccggctatgttaaagcgtgggttggtggtattaactacgaa
catttcaaatacgaccaggtaaaaatgggaaccaggcaagtaggttcaacagctaaacct
tttacctattcggtagcgatagaaaatggttactcaccatgttatcaggtcttgaatgag
ccggtaacgattgaagttccgggcagtgcgccatggacgccaaagtctggcggtacctta
ccgggttacattactttgcagaaagcccttgccttttctcagaattacattgctgcttac
ctgatgaaacaagtaggccctacagcagtcgctacactggccaaaagaatggggatcact
tctaatgtacctgcatatccatctatcgcattaggctcttttgatgcctctgtatttgat
atggtaggtgcttacagtgtatttgccaataaaggagtgtggacacagccaacttatatt
ttaaggattgaagataaaaacggtgtggtcctgttctctcaaacaccacaaaaacaccct
gcaatgaacgaagacgtcgcttatgtgatgacacgtatgctggaaggtgtagtgaaaaac
ggttatggctatggtctgatcggtaaatacggactaaagaaccctattggtggtaaaacc
ggaacaacacagaataattctgatggatggtttgtagggattacccctgatcttgttgct
ggggtatggacaggttgtgaagaccgcgcatttcactttatcaataccagagaaggtgag
ggttcaaaaacagctatgcctatttttggtggcttcttcaagaaagtatatgccaatcct
aaattaaaaataagtaaaggcgactttgaagtaccgaaaagcggtgtatctatcacttac
gattgtaaccaatatcaacagcaacaaactgataccacagaactggacaagaagctgggt
ttttaa
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