Pedobacter cryoconitis: AY601_3996
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Entry
AY601_3996 CDS
T04341
Name
(GenBank) Ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pcm
Pedobacter cryoconitis
Brite
KEGG Orthology (KO) [BR:
pcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcm03019
]
AY601_3996
03009 Ribosome biogenesis [BR:
pcm03009
]
AY601_3996
Messenger RNA biogenesis [BR:
pcm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AY601_3996
Ribosome biogenesis [BR:
pcm03009
]
Prokaryotic type
rRNA processing factors
AY601_3996
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
DUF2179
DUF6305
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AMQ00848
UniProt:
A0A127VHV8
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All DBs
Position
4708467..4710017
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AA seq
516 aa
AA seq
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MVKELIIDSSPTGVTIALIEDKQLVELHKEHVNTNYAVGDIYLGRIKKIMPGLNAAFVDV
GYEKDAFLHYFDLGPQVQSLLKLTKIKRNGTVSGTLLDNLKLEADINKAGKISEVVSKNM
LIPVQIAKEPISTKGPRLSSDLSIAGRYIVLVPFSNVISISKKIKSNTERNRLKKIIESI
KPKNFGVIIRTVSEGKGVEELQKDLLDSVSKWENFIKKLPEAEPSKRVWGEMDRTSTLIR
DILSVDFTNVYVNDAGLFEDIRSYVHEISPEMEKIVKPYKHKEPIFEHFGIEKQIKNGFG
KTVNLAGGAYLVVEHTEALHVIDVNSGNRTANKENQEDNALQVNKEAAKEIARQLRLRDM
GGIVVIDFIDMHKPVNRKMLFDYLRELMLLDRAKHTILPPSKFGLVQITRQRVRPEMNIV
TSEVCPMCHGTGEIKASIVLMDDIESNMNYILREQNEKNITLCVHPYIEAFIKKGVYSLQ
WKWFFKFGQKIKVKAVPSYLLTEFHFISSKDEEIKL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
ttggtaaaggaattaattatcgattcatctcctacgggagtaaccatagctttgattgaa
gataaacaacttgtagaacttcataaagaacacgtcaacacaaattacgccgtaggcgac
atctatttaggccgcataaagaaaattatgccgggattaaatgctgcgtttgttgatgtg
ggttatgagaaagatgcttttttgcattatttcgatcttggtccgcaagttcaatcttta
ttaaagcttacaaaaattaagcggaatggcactgttagtgggacgttattagacaattta
aagcttgaagccgatattaataaggctggcaaaatatctgaggtcgtttccaaaaacatg
cttatacctgttcaaatagctaaagagcctatttcaactaaaggaccgcgtctaagctct
gatctttctattgcaggacggtacattgtattagtccctttttctaatgtaatatcaatc
tcgaaaaaaattaagagtaatacagaacgtaatcgtttaaaaaagattattgaaagtatt
aagcctaaaaacttcggagtaatcatcagaacagtttctgaaggtaaaggtgttgaagaa
ttgcaaaaagacttattggattctgtctctaagtgggaaaatttcattaagaaattacct
gaggccgagccttccaaacgtgtttggggcgagatggacagaacgtcaacgttaatccgt
gacattttaagtgttgacttcactaatgtttatgtgaacgatgcaggtttgttcgaagat
atccgttcttatgtgcatgagatttctccggaaatggagaaaatagtaaaaccttacaag
cacaaggaacctatatttgagcatttcggaattgaaaaacaaattaagaatggctttggc
aaaaccgtaaatcttgccggcggagcttatcttgttgtggaacataccgaagcacttcac
gttatcgacgttaacagcggtaacagaacagctaataaagaaaaccaggaagacaacgcc
ttacaggtaaacaaggaagctgcaaaggaaattgcgcgtcaactcagactacgtgatatg
ggtggtattgtagtgatcgattttatcgatatgcataaaccagtaaaccgtaaaatgtta
tttgactatctgcgtgaactgatgctgctggatcgtgctaaacacactattttgcctcca
agtaagttcggccttgtgcaaattacacgtcagcgtgttcgtcctgagatgaacattgtg
accagtgaagtttgtccaatgtgtcacggtactggtgaaattaaagcgagcatcgtttta
atggatgatattgaaagtaatatgaattacattttgcgtgagcagaatgaaaaaaacatt
acgctttgtgtacacccgtatatagaggcctttatcaaaaaaggtgtttactccctgcaa
tggaagtggttctttaaattcggacagaaaattaaagttaaggcagttccgtcttactta
ttaacagagtttcattttatctcttctaaagacgaagaaataaaactgtaa
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